CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID HVSMEf0005F10r2_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 69.7 HVSMEf0005F10r2_at HVSMEf0005F10r2 - - 1e+1 Atcg01310 - S.X. H.G.
0.78 91.2 Contig6082_at Contig6082 - - 2e+0 At3g52760 integral membrane Yip1 family protein S.X. H.G.
0.67 84.7 Contig12375_at Contig12375 - - 1e-4 At3g28940 avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putative S.X. H.G.
0.57 74.9 Contig21045_at Contig21045 - - 4e+0 At5g51130 methyltransferase S.X. H.G.
0.53 69.7 Contig3024_at Contig3024 - - 3e+0 At3g13310 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.50 66.9 Contig8695_at Contig8695 - - 3e+0 At3g28140 calmodulin-binding protein S.X. H.G.
0.46 61.0 Contig9509_at Contig9509 - - 7e-1 At3g23980 unknown protein S.X. H.G.
0.44 58.9 Contig10037_at Contig10037 - - 9e-1 At5g23760 heavy-metal-associated domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.6 99.7 GSM261047 after 3 days in mannitol medium rep3 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
16.5 99.6 GSM440968 Stressed palea_Rep3 GSE17669 Gene expression in the barley spike during drought stress
12.2 99.4 GSM261046 after 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.6 98.8 GSM440960 Stressed lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
8.2 98.7 GSM261045 after 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.0 98.4 GSM440972 Stressed awn_Rep1 GSE17669 Gene expression in the barley spike during drought stress
6.1 98.0 GSM215727 Control (DMSO) treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
5.4 97.5 GSM440966 Stressed palea_Rep1 GSE17669 Gene expression in the barley spike during drought stress
5.0 97.2 GSM440978 Stressed seed_Rep1 GSE17669 Gene expression in the barley spike during drought stress
4.4 96.6 GSM440961 Stressed lemma_Rep2 GSE17669 Gene expression in the barley spike during drought stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 34 Contig14385_at Contig14385 - - 7e-1 At5g15130 WRKY72 C.G. S.X.
0.03 1e+0 32 Contig24862_at Contig24862 - - 1e+0 At1g53635 unknown protein C.G. S.X.
0.02 5e+0 30 Contig6408_at Contig6408 - - 6e-1 At1g21900 emp24/gp25L/p24 family protein C.G. S.X.
0.04 5e+0 30 Contig15627_s_at Contig15627 - - 4e+0 At5g15802 unknown protein C.G. S.X.
0.02 5e+0 30 Contig17293_at Contig17293 - - 1e-1 At5g57790 unknown protein C.G. S.X.
0.01 5e+0 30 Contig6108_at Contig6108 - - 7e-20 At4g34860 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative C.G. S.X.
0.02 5e+0 30 Contig16143_at Contig16143 - - 2e+0 At1g48145 unknown protein C.G. S.X.
0.02 5e+0 30 Contig17556_at Contig17556 - - 8e+0 At5g53940 yippee family protein C.G. S.X.
0.03 5e+0 30 Contig15213_at Contig15213 - - 1e-1 At4g27745 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+1 30 Arabidopsis thaliana Atcg01310 - - encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex - - - C.G. S.X.
0.03 4e+0 32 Glycine max HgAffx.6715.1.S1_at CB825496 - - 1e+0 At5g08590 SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1) C.G. S.X.
0.07 4e-1 36 Oryza sativa Os02g0269500 9630.m01580 - - 2e+0 At2g27020 PAG1 C.G. S.X.
0.04 4e+0 32 Populus trichocarpa Ptp.1453.1.A1_s_at CK093379 hypothetical protein - 4e+0 At2g46600 calcium-binding protein, putative C.G. S.X.
0.57 5e-51 200 Triticum aestivum Ta.3245.2.A1_at CA648996 - - 2e-1 At3g21580 cobalt ion transmembrane transporter C.G. S.X.
0.04 3e+0 30 Vitis vinifera 1618752_at CD799496 - - 4e-3 At1g79975 - C.G. S.X.
0.11 5e-6 50 Zea mays Zm.16433.1.A1_at CF348894 - - 7e-2 At1g27860 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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