Gene omics information

Query gene ID	HVSMEc0009L17r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HVSMEc0009L17r2_at	HVSMEc0009L17r2	-	-	3e+0	At1g04778	unknown protein	S.X.	H.G.	Please select
0.50	66.9	HW06A14u_at	HW06A14u	-	-	2e+1	At5g55710	-	S.X.	H.G.	Please select
0.22	24.2	HVSMEc0005D12r2_s_at	HVSMEc0005D12r2	-	-	8e-1	At5g08185	MIR162A (MICRORNA 162A)	S.X.	H.G.	Please select
0.09	7.4	HT05K24u_at	HT05K24u	-	-	4e+0	At4g26520	fructose-bisphosphate aldolase, cytoplasmic	S.X.	H.G.	Please select
0.09	7.4	HT07P24u_at	HT07P24u	-	-	4e+0	At3g49305	-	S.X.	H.G.	Please select
0.03	2.6	S0000800072B12F1_at	S0000800072B12F1	-	-	9e+0	At1g07476	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.0	99.6	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo
14.1	99.5	GSM160744	drought control rep2	GSE6990	Barley drought stress
12.2	99.4	GSM160815	drought control rep3	GSE6990	Barley drought stress
9.4	99.0	GSM261030	Dicktoo-control-rep1	GSE10329	Low temperature stress in cv. Dicktoo
9.0	98.9	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
8.7	98.9	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo
8.4	98.8	GSM160464	drought control rep1	GSE6990	Barley drought stress
8.4	98.8	GSM160823	19% SWC rep1	GSE6990	Barley drought stress
8.0	98.7	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
7.4	98.5	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.63	5e-96	349	HVSMEc0020G05f_x_at	HVSMEc0020G05f	-	-	1e+1	At3g53075	beta-galactosidase/ sugar binding	C.G.	S.X.	Please select
0.03	6e-9	59	Contig13544_at	Contig13544	-	-	5e-2	At1g19300	PARVUS (PARVUS)	C.G.	S.X.	Please select
0.07	6e-6	50	Contig19510_at	Contig19510	-	-	4e-1	At5g16440	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	C.G.	S.X.	Please select
0.02	2e-2	38	Contig7281_at	Contig7281	-	-	8e-1	At1g53670	MSRB1 (methionine sulfoxide reductase B 1)	C.G.	S.X.	Please select
0.02	9e-2	36	Contig1934_at	Contig1934	-	-	7e-13	At1g11840	ATGLX1 (GLYOXALASE I HOMOLOG)	C.G.	S.X.	Please select
0.02	3e-1	34	Contig6722_at	Contig6722	-	-	2e-1	At2g11890	adenylate cyclase	C.G.	S.X.	Please select
0.03	3e-1	34	Contig10963_at	Contig10963	-	-	2e+0	At4g33640	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	34	HA11C24u_x_at	HA11C24u	-	-	2e-8	At4g25630	FIB2 (FIBRILLARIN 2)	C.G.	S.X.	Please select
0.03	3e-1	34	Contig16695_at	Contig16695	-	-	2e-2	At5g20900	JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	3e+0	32	Arabidopsis thaliana	At1g04778	5007663	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	3e-4	46	Glycine max	Gma.13839.1.A1_at	CD407758	-	-	6e-20	At3g62660	GATL7 (Galacturonosyltransferase-like 7)	C.G.	S.X.	Please select
0.17	2e-67	256	Oryza sativa	Os03g0300900	AK119594.1	-	Glycosyl transferase, family 8 protein	5e-9	At3g62660	GATL7 (Galacturonosyltransferase-like 7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	6e-2	38	Populus trichocarpa	PtpAffx.25163.2.A1_at	CV230336	glycosyltransferase, CAZy family GT8	-	7e-21	At3g62660	GATL7 (Galacturonosyltransferase-like 7)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.73	2e-130	464	Triticum aestivum	Ta.12910.1.S1_at	BQ281259	-	-	1e+0	At3g52620	unknown protein	C.G.	S.X.	Please select
0.08	9e-4	42	Vitis vinifera	1615986_at	CF214784	hypothetical protein LOC100265777	-	1e+0	At1g13250	GATL3 (Galacturonosyltransferase-like 3)	C.G.	S.X.	Please select
0.08	3e-7	54	Zea mays	Zm.13650.1.A1_at	AY107231.1	hypothetical protein LOC100274424	-	1e+0	At3g50760	GATL2 (Galacturonosyltransferase-like 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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