Gene omics information

Query gene ID	HVSMEb0010O13f2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	66.9	HVSMEb0010O13f2_at	HVSMEb0010O13f2	-	-	3e+0	At5g44920	Toll-Interleukin-Resistance (TIR) domain-containing protein	S.X.	H.G.	Please select
0.43	56.4	Contig11018_at	Contig11018	-	-	1e-48	At3g25140	QUA1 (QUASIMODO 1)	S.X.	H.G.	Please select
0.40	53.1	Contig8786_at	Contig8786	-	-	1e-17	At1g50140	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	S.X.	H.G.	Please select
0.40	53.1	Contig15782_at	Contig15782	-	-	1e+0	At2g42760	unknown protein	S.X.	H.G.	Please select
0.22	24.2	Contig8797_at	Contig8797	-	-	1e-2	At4g09080	TOC75-IV	S.X.	H.G.	Please select
0.19	19.6	Contig7521_at	Contig7521	-	-	2e-3	At5g06370	NC domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.5	99.8	GSM373009	genotype: 11542 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
27.9	99.8	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
26.9	99.8	GSM372986	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
25.7	99.8	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
25.0	99.8	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
22.1	99.8	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
20.7	99.7	GSM372983	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
20.4	99.7	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
20.3	99.7	GSM372987	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
19.1	99.7	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	2e-12	71	Contig22018_at	Contig22018	-	-	3e-1	At1g17010	oxidoreductase, 2OG-Fe(II) oxygenase family protein	C.G.	S.X.	Please select
0.15	5e-10	63	Contig16392_at	Contig16392	-	-	6e-1	At1g27710	glycine-rich protein	C.G.	S.X.	Please select
0.03	4e-1	34	Contig16177_at	Contig16177	-	-	9e-14	At4g32890	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig5762_at	Contig5762	-	-	1e-11	At5g04430	BTR1L (BINDING TO TOMV RNA 1L (LONG FORM))	C.G.	S.X.	Please select
0.04	2e+0	32	HA11L20u_x_at	HA11L20u	-	-	8e-1	At3g61370	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Contig13393_at	Contig13393	-	-	3e-5	At4g19400	actin binding	C.G.	S.X.	Please select
0.02	2e+0	32	Contig12995_at	Contig12995	-	-	2e+0	At4g12230	esterase/lipase/thioesterase family protein	C.G.	S.X.	Please select
0.04	6e+0	30	S0001100116E08F1_x_at	S0001100116E08F1	-	-	1e+1	At3g29639	-	C.G.	S.X.	Please select
0.01	6e+0	30	Contig9386_at	Contig9386	-	-	8e-17	At5g05980	ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	32	Arabidopsis thaliana	At5g44920	834522	Toll-Interleukin-Resistance (TIR) domain-containing protein	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	Gma.13218.1.A1_s_at	CD391892	-	-	1e+1	At4g01640	-	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	OsAffx.31230.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	3e-1	36	Populus trichocarpa	PtpAffx.27712.1.S1_at	CK096276	hypothetical protein	-	2e+0	At2g32150	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.32	7e-54	210	Triticum aestivum	Ta.8049.1.A1_at	BQ161184	-	-	8e+0	At5g11590	TINY2 (TINY2)	C.G.	S.X.	Please select
0.05	1e+0	32	Vitis vinifera	1620361_at	CF201808.1	hypothetical LOC100245531	-	6e+0	At3g60180	uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative	C.G.	S.X.	Please select
0.04	1e+0	32	Zea mays	Zm.14256.1.A1_at	BM381492	-	-	5e-2	At1g07790	HTB1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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