Gene omics information

Query gene ID	HVSMEa0009I06r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.56	74.3	HVSMEa0009I06r2_at	HVSMEa0009I06r2	-	-	9e+0	At5g59060	unknown protein	S.X.	H.G.	Please select
0.71	87.1	Contig12938_at	Contig12938	-	-	1e+0	At1g36920	unknown protein	S.X.	H.G.	Please select
0.60	77.3	Contig11312_at	Contig11312	-	-	1e+1	At5g27050	AGL101	S.X.	H.G.	Please select
0.38	49.5	Contig9136_at	Contig9136	-	-	1e-5	At3g51140	-	S.X.	H.G.	Please select
0.33	42.6	Contig5644_at	Contig5644	-	-	3e-114	At3g58500	PP2A-3 (PROTEIN PHOSPHATASE 2A-3)	S.X.	H.G.	Please select
0.26	30.4	Contig13002_at	Contig13002	-	-	2e-10	At1g45150	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.2	99.7	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
17.0	99.6	GSM311255	hsp5_with_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
15.0	99.5	GSM161221	cold treatment rep3	GSE6993	Barley low temperature stress
10.1	99.1	GSM398266	HS41-1_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.0	99.1	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.7	99.0	GSM311256	hsp5_without_aphids_1	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
8.6	98.8	GSM398255	Martin_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.6	98.8	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo
7.0	98.4	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
6.6	98.2	GSM261024	ABA-Early-rep1	GSE10328	ABA experiment

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	3e-72	270	Contig8125_at	Contig8125	-	-	4e-1	At5g11930	glutaredoxin family protein	C.G.	S.X.	Please select
0.19	5e-15	79	Contig12793_at	Contig12793	-	-	6e+0	At5g39580	peroxidase, putative	C.G.	S.X.	Please select
0.04	1e+0	32	HS17C12u_at	HS17C12u	-	-	7e-2	At1g18750	AGL65 (AGAMOUS-LIKE 65)	C.G.	S.X.	Please select
0.02	1e+0	32	Contig10814_at	Contig10814	-	-	5e-2	At3g02660	emb2768 (EMBRYO DEFECTIVE 2768)	C.G.	S.X.	Please select
0.05	1e+0	32	Contig15853_at	Contig15853	-	-	5e+0	At1g28395	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	Contig13410_at	Contig13410	-	-	6e-1	At1g22275	ZYP1b	C.G.	S.X.	Please select
0.03	1e+0	32	Contig12977_at	Contig12977	-	-	5e+0	At4g16750	DRE-binding transcription factor, putative	C.G.	S.X.	Please select
0.05	4e+0	30	HT07C05r_s_at	HT07C05r	-	-	2e+0	At1g54140	TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT)	C.G.	S.X.	Please select
0.01	4e+0	30	Contig6577_at	Contig6577	-	-	1e+0	At1g19410	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	9e+0	30	Arabidopsis thaliana	At5g59060	836023	unknown protein	F:molecular_function unknown;P:unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	3e+0	32	Glycine max	PsAffx.CL429Contig1_at	PsAffx.CL429Contig1	-	-	3e-1	At3g06040	ribosomal protein L12 family protein	C.G.	S.X.	Please select
0.28	1e-12	73	Oryza sativa	Os01g0662300	AF010581.1	-	Chloroplast 50S ribosomal protein L12	1e+0	At5g65140	trehalose-6-phosphate phosphatase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	5e-2	38	Populus trichocarpa	PtpAffx.5175.1.A1_s_at	CV258501	hypothetical protein	-	3e+1	At5g53720	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.41	3e-46	184	Triticum aestivum	Ta.14671.2.S1_a_at	CK213901	-	-	2e+0	At5g24170	-	C.G.	S.X.	Please select
0.05	3e+0	30	Vitis vinifera	1619050_at	CB977861	hypothetical protein LOC100249358	-	2e+0	At5g53280	PDV1 (PLASTID DIVISION1)	C.G.	S.X.	Please select
0.19	1e-15	81	Zea mays	Zm.9038.1.S1_at	BM331839	-	-	1e+0	At2g44530	ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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