Gene omics information

Query gene ID HVSMEa0008L11r2_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1HVSMEa0008L11r2_atHVSMEa0008L11r2--2e-1At3g50960PLP3a (Phosducin-like protein 3 homolog)S.X.H.G.
0.1210.4Contig6211_atContig6211--8e-9At1g04630MEE4 (maternal effect embryo arrest 4)S.X.H.G.
0.119.4Contig5810_s_atContig5810--5e-2At4g23410TET5 (TETRASPANIN5)S.X.H.G.
0.064.8Contig3810_atContig3810--3e-18At1g09350AtGolS3 (Arabidopsis thaliana galactinol synthase 3)S.X.H.G.
0.032.6HD07I22r_s_atHD07I22r--5e+0At4g21090adrenodoxin-like ferredoxin 1S.X.H.G.
0.021.8Contig191_s_atContig191--7e-6At2g33740CUTAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.4100.0GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
55.3100.0GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
31.999.9GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
23.399.8GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
19.499.7GSM238437Embryo 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
18.399.7GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
18.099.7GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seeds
15.099.5GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
14.999.5GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seeds
9.799.0GSM688903 h control replicate 2GSE3097Barley1 salinity stress study
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-236Contig23469_atContig23469--7e+0At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)C.G.S.X.
0.028e-236Contig6214_atContig6214--2e-1At3g50930BCS1 (CYTOCHROME BC1 SYNTHESIS)C.G.S.X.
0.021e+032Contig6946_atContig6946--1e-5At5g01200myb family transcription factorC.G.S.X.
0.031e+032Contig11410_atContig11410--4e-1At5g47150YDG/SRA domain-containing proteinC.G.S.X.
0.031e+032Contig15386_atContig15386--2e+0At3g50520phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
0.021e+032Contig11466_atContig11466--6e-4At4g12070unknown proteinC.G.S.X.
0.021e+032Contig8917_atContig8917--8e-3At5g28630glycine-rich proteinC.G.S.X.
0.021e+032Contig1839_atContig1839--1e-2At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)C.G.S.X.
0.035e+030Contig16506_atContig16506--1e-13At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Arabidopsis thalianaAt3g50960824260PLP3a (Phosducin-like protein 3 homolog)Encodes a protein that functions in microtubule assembly. PLP3a can bind to several different tubulin family members in Y2H assays. Plants with reduced levels of both PLP3a and PLP3b (At5g66410) show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.---C.G.S.X.
0.049e-134Glycine maxGmaAffx.82172.3.S1_atBM520804--3e-1At5g23760heavy-metal-associated domain-containing proteinC.G.S.X.
0.054e-756Oryza sativaOs06g0643500AK103715.1-ADR11 protein (Fragment)3e+0At1g7406060S ribosomal protein L6 (RPL6B)C.G.S.X.
0.052e-136Populus trichocarpaPtpAffx.4493.4.A1_atCV262264--8e-1At5g43570serine-type endopeptidase inhibitorC.G.S.X.
0.225e-548Triticum aestivumTa.13771.1.S1_atAL820976--3e+0At1g70440SRO3 (SIMILAR TO RCD ONE 3)C.G.S.X.
0.045e-236Vitis vinifera1607162_s_atCF512517--3e+0At2g30570PSBW (PHOTOSYSTEM II REACTION CENTER W)C.G.S.X.
0.041e+032Zea maysZm.17538.1.S1_atCK370571hypothetical protein LOC100273692-1e+0At5g50710unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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