Gene omics information

Query gene ID HVSMEa0004N20r2_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7689.8HVSMEa0004N20r2_atHVSMEa0004N20r2--1e+0At4g22115SCRL14 (SCR-Like 14)S.X.H.G.
0.6279.1Contig6845_atContig6845--2e+0At4g33350chloroplast inner membrane import protein Tic22, putativeS.X.H.G.
0.6279.1HVSMEc0010O09r2_atHVSMEc0010O09r2--1e+0At5g28630glycine-rich proteinS.X.H.G.
0.5774.9Contig15729_atContig15729--3e-2At3g11280myb family transcription factorS.X.H.G.
0.5268.3HVSMEc0011A22r2_atHVSMEc0011A22r2--1e+0At2g41920protein kinase family proteinS.X.H.G.
0.5066.9Contig10750_atContig10750--1e-4At1g51600TIFY2AS.X.H.G.
0.4863.2HK05N20r_atHK05N20r--3e+0Atcg00790-S.X.H.G.
0.4863.2HVSMEc0013C11r2_atHVSMEc0013C11r2--7e-2At2g05600-S.X.H.G.
0.4762.2HVSMEf0004A21r2_atHVSMEf0004A21r2--2e-1At2g14045unknown proteinS.X.H.G.
0.4661.0Contig22141_atContig22141--3e+0At3g07440unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.899.6GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
14.299.5GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.599.5GSM311260kara_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
10.999.2GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.799.2GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.699.2GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.398.8GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
8.298.7GSM261052Bonus Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.198.7GSM311261kara_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
8.198.7GSM311259kara_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Contig20431_atContig20431--5e+0At3g09910ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B)C.G.S.X.
0.026e-134Contig14166_atContig14166--5e-7At2g21340antiporter/ drug transporterC.G.S.X.
0.026e-134Contig17925_atContig17925--2e-3At5g43670transport protein, putativeC.G.S.X.
0.026e-134Contig14657_atContig14657--2e-10At1g50460HKL1 (HEXOKINASE-LIKE 1)C.G.S.X.
0.012e+032Contig13685_atContig13685--2e-8At1g08730XICC.G.S.X.
0.012e+032Contig2625_atContig2625--2e-60At5g60790ATGCN1C.G.S.X.
0.032e+032HA12B04u_atHA12B04u--2e-1At2g38250DNA-binding protein-relatedC.G.S.X.
0.032e+032Contig21240_atContig21240--1e-8At1g70750unknown proteinC.G.S.X.
0.012e+032Contig7177_atContig7177--6e-31At4g09980EMB1691 (EMBRYO DEFECTIVE 1691)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt4g221153770429SCRL14 (SCR-Like 14)Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).---C.G.S.X.
0.043e-240Glycine maxGma.4678.1.A1_atAW309914--3e-10At4g35970APX5 (ASCORBATE PEROXIDASE 5)C.G.S.X.
0.123e-1893Oryza sativaOs05g0406100AK070068.1-Inosine/uridine-preferring nucleoside hydrolasedomain containing protein6e-3At5g18860inosine-uridine preferring nucleoside hydrolase family proteinC.G.S.X.
0.037e+032Populus trichocarpaPtpAffx.71913.1.S1_atCA823382auxin efflux carrier component-2e+0At5g58060YKT61C.G.S.X.
0.711e-148525Triticum aestivumTa.12346.1.A1_atBQ172156--9e-1At4g22115SCRL14 (SCR-Like 14)C.G.S.X.
0.036e+030Vitis vinifera1617301_atCF514880--4e+0At5g06040self-incompatibility protein-relatedC.G.S.X.
0.022e+032Zea maysZm.10400.1.S1_atBQ163760--2e-3At2g19540transducin family protein / WD-40 repeat family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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