CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID HVSMEa0003D12r2_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.89 95.4 HVSMEa0003D12r2_at HVSMEa0003D12r2 - - 3e+0 At4g00335 RHB1A S.X. H.G.
0.63 80.3 Contig20443_at Contig20443 - - 3e-31 At1g36160 ACC1 (ACETYL-COENZYME A CARBOXYLASE 1) S.X. H.G.
0.18 18.2 HU13P13u_at HU13P13u - - 4e+0 At5g44130 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR) S.X. H.G.
0.17 16.9 HS05I23r_at HS05I23r - - 8e+0 At3g22435 XS domain-containing protein S.X. H.G.
0.09 7.4 EBro08_SQ007_H23_at EBro08_SQ007_H23 - - 8e-1 At1g02450 NIMIN1 (NIM1-INTERACTING 1) S.X. H.G.
0.08 6.5 HA30O17r_at HA30O17r - - 9e-10 At4g33865 40S ribosomal protein S29 (RPS29C) S.X. H.G.
0.08 6.5 EBro08_SQ004_I03_at EBro08_SQ004_I03 - - 5e+0 At4g34750 auxin-responsive protein, putative / small auxin up RNA (SAUR_E) S.X. H.G.
0.07 5.8 Contig22928_at Contig22928 - - 5e-1 At5g09960 unknown protein S.X. H.G.
0.05 4.1 HC113H04_SK_at HC113H04_SK - - 3e+0 At2g42410 ZFP11 (ZINC FINGER PROTEIN 11) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.8 99.2 GSM398250 Martin_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.7 99.2 GSM398253 Martin_1d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.4 99.0 GSM398278 Moroc9-75_1d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.4 98.8 GSM372959 genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.3 98.8 GSM130804 JA, biological rep2 GSE5605 Expression data from barley under salinity stress and JA treatment
7.9 98.7 GSM398251 Martin_0d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.4 98.5 GSM398277 Moroc9-75_1d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.2 98.5 GSM398254 Martin_1d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.0 98.4 GSM363463 5 mM B(OH)3 treatment (5B) - rep1 GSE14521 Late response to boron toxicity in barley leaves
6.8 98.3 GSM398282 Moroc9-75_5d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-2 38 Contig4234_s_at Contig4234 - - 1e-3 At1g12920 ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2) C.G. S.X.
0.01 2e+0 32 Contig7227_at Contig7227 - - 7e-14 At3g54540 ATGCN4 C.G. S.X.
0.02 2e+0 32 Contig4582_at Contig4582 - - 4e-42 At2g19830 SNF7.2 C.G. S.X.
0.02 2e+0 32 Contig13403_at Contig13403 - - 9e-31 At5g36950 DegP10 (DegP protease 10) C.G. S.X.
0.03 2e+0 32 Contig21164_at Contig21164 - - 2e-2 At2g35810 unknown protein C.G. S.X.
0.01 2e+0 32 Contig7226_at Contig7226 - - 2e-21 At3g54540 ATGCN4 C.G. S.X.
0.02 2e+0 32 Contig4143_at Contig4143 - - 5e-1 At3g06778 heat shock protein binding / unfolded protein binding C.G. S.X.
0.04 6e+0 30 EBpi01_SQ002_P23_at EBpi01_SQ002_P23 - - 2e-1 At4g15650 protein kinase-related C.G. S.X.
0.04 6e+0 30 Contig26369_at Contig26369 - - 4e+0 At4g02620 vacuolar ATPase subunit F family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At4g00335 828093 RHB1A F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;PMOFV - - - C.G. S.X.
0.04 3e-1 36 Glycine max GmaAffx.39703.2.S1_s_at AW307363 - - 5e-2 At2g40085 unknown protein C.G. S.X.
0.04 4e-1 36 Oryza sativa Os02g0656200 CB620016 - Pleckstrin-homology-related domain containingprotein 2e+0 At5g53030 unknown protein C.G. S.X.
0.03 4e+0 32 Populus trichocarpa PtpAffx.31146.1.A1_at CV245487 - - 1e+0 At4g35940 unknown protein C.G. S.X.
0.36 2e-26 119 Triticum aestivum TaAffx.70725.1.S1_at BQ801321 - - 3e+0 At4g38000 Dof-type zinc finger domain-containing protein C.G. S.X.
0.04 2e-1 34 Vitis vinifera 1611155_at BQ792095 - - 3e+0 At1g05710 ethylene-responsive protein, putative C.G. S.X.
0.05 1e+0 32 Zea mays ZmAffx.722.1.A1_at AI739911 - - 7e-19 At5g02960 40S ribosomal protein S23 (RPS23B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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