Gene omics information

Query gene ID	HU11L10u_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.36	47.1	HU11L10u_s_at	HU11L10u	-	-	2e+0	At1g59865	unknown protein	S.X.	H.G.	Please select
0.60	77.3	Contig23686_at	Contig23686	-	-	4e+0	At2g10014	unknown protein	S.X.	H.G.	Please select
0.50	66.9	Contig7170_at	Contig7170	-	-	2e+0	At1g32540	LOL1 (LSD ONE LIKE 1)	S.X.	H.G.	Please select
0.46	61.0	Contig13468_at	Contig13468	-	-	2e+0	At2g33850	unknown protein	S.X.	H.G.	Please select
0.28	35.5	Contig14904_at	Contig14904	-	-	2e+0	At2g28330	unknown protein	S.X.	H.G.	Please select
0.25	28.9	Contig13164_at	Contig13164	-	-	2e+0	At5g60553	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.8	99.1	GSM282032	Malting_day1_Morex_rep1	GSE11200	Expression data from malting barley seeds
7.0	98.4	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.9	98.3	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.8	97.8	GSM261077	Albina e-16 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.1	97.3	GSM261075	Albina e-16 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.6	96.8	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.4	96.6	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.4	96.6	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.0	96.0	GSM261063	Xantha s-46 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.9	95.8	GSM261067	Xantha s-46 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	1e-132	470	Contig7406_at	Contig7406	-	-	9e-14	At2g41960	unknown protein	C.G.	S.X.	Please select
0.05	3e-1	34	HVSMEi0013P04r2_s_at	HVSMEi0013P04r2	-	-	4e+0	At3g15350	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.05	3e-1	34	HVSMEi0013P04r2_at	HVSMEi0013P04r2	-	-	4e+0	At3g15350	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.02	1e+0	32	Contig7203_at	Contig7203	-	-	2e-7	At2g39770	CYT1 (CYTOKINESIS DEFECTIVE 1)	C.G.	S.X.	Please select
0.03	1e+0	32	Contig7093_at	Contig7093	-	-	3e-2	At4g34970	ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)	C.G.	S.X.	Please select
0.03	1e+0	32	rbags10j11_s_at	rbags10j11	-	-	1e+0	At1g43900	protein phosphatase 2C, putative / PP2C, putative	C.G.	S.X.	Please select
0.03	1e+0	32	Contig12318_at	Contig12318	-	-	6e+0	At3g55360	CER10	C.G.	S.X.	Please select
0.02	1e+0	32	Contig10499_at	Contig10499	-	-	7e-10	At5g59700	protein kinase, putative	C.G.	S.X.	Please select
0.02	1e+0	32	Contig7837_at	Contig7837	-	-	7e-4	At5g04200	AtMC9 (metacaspase 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e+0	32	Arabidopsis thaliana	At1g59865	2745837	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	1e-2	40	Glycine max	Gma.3405.2.S1_s_at	BG882930	-	-	1e+0	At1g10060	branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1)	C.G.	S.X.	Please select
0.03	5e+0	32	Oryza sativa	Os04g0353600	CB641510	-	Male sterility protein family protein	2e+0	At1g35333	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	8e-1	34	Populus trichocarpa	PtpAffx.222159.1.S1_at	pmrna39400	hypothetical protein	-	8e-1	At5g27020	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.32	2e-78	291	Triticum aestivum	Ta.8095.1.S1_at	CK198187	-	-	2e+0	At3g60650	unknown protein	C.G.	S.X.	Please select
0.05	1e-5	48	Vitis vinifera	1609300_at	CF203393.1	hypothetical protein LOC100261276	-	1e-19	At3g52990	pyruvate kinase, putative	C.G.	S.X.	Please select
0.06	4e+0	30	Zea mays	ZmAffx.38.1.A1_at	AI657470	-	-	2e+0	At4g04423	endo-1,3(4)-beta-glucanase	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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