Gene omics information

Query gene ID	HU09E15u_x_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HU09E15u_x_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	S.X.	H.G.	Please select
0.91	98.1	HU09E15u_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	S.X.	H.G.	Please select
0.73	88.7	Contig19683_at	Contig19683	-	-	1e+0	At3g24820	BSD domain-containing protein	S.X.	H.G.	Please select
0.67	84.7	Contig19665_at	Contig19665	-	-	3e-1	At3g16820	F-box family protein	S.X.	H.G.	Please select
0.50	66.9	Contig26505_at	Contig26505	-	-	1e+0	At5g54300	unknown protein	S.X.	H.G.	Please select
0.46	61.0	rbags23g17_s_at	rbags23g17	-	-	3e-1	At3g46410	protein kinase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.5	99.6	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.1	99.6	GSM261064	Xantha s-46 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.2	99.1	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.3	99.0	GSM160815	drought control rep3	GSE6990	Barley drought stress
8.2	98.7	GSM160744	drought control rep2	GSE6990	Barley drought stress
8.0	98.7	GSM261041	Dicktoo-deacclimation-rep3	GSE10329	Low temperature stress in cv. Dicktoo
7.4	98.5	GSM261030	Dicktoo-control-rep1	GSE10329	Low temperature stress in cv. Dicktoo
6.9	98.3	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
6.9	98.3	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo
6.8	98.3	GSM261058	Xantha b-12 Cotrol rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	0	835	HU09E15u_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	C.G.	S.X.	Please select
0.05	1e-10	65	Contig2849_at	Contig2849	-	-	2e-1	At1g23170	unknown protein	C.G.	S.X.	Please select
0.03	3e-5	48	Contig1966_at	Contig1966	-	-	2e-1	At4g38320	HHP5 (heptahelical protein 5)	C.G.	S.X.	Please select
0.02	4e-4	44	Contig11496_at	Contig11496	-	-	5e-11	At1g23280	MAK16 protein-related	C.G.	S.X.	Please select
0.07	2e-3	42	HVSMEb0007C23r2_at	HVSMEb0007C23r2	-	-	1e+0	At5g24250	unknown protein	C.G.	S.X.	Please select
0.04	7e-3	40	Contig23267_at	Contig23267	-	-	5e+0	At3g03830	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.04	7e-3	40	Contig22100_at	Contig22100	-	-	9e-1	At2g23440	unknown protein	C.G.	S.X.	Please select
0.04	7e-3	40	Contig9615_at	Contig9615	-	-	1e+0	At1g35880	-	C.G.	S.X.	Please select
0.05	7e-3	40	Contig2389_at	Contig2389	-	-	5e+0	At5g38180	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At4g37090	829863	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.82109.1.S1_at	BI427452	-	-	2e-1	At5g66060	iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	C.G.	S.X.	Please select
0.03	4e-1	36	Oryza sativa	Os01g0185300	AK065131.1	-	Transferase family protein	2e-1	At3g21700	SGP2	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	5e+0	32	Populus trichocarpa	PtpAffx.212288.1.S1_at	pmrna24090	hypothetical protein	-	5e+0	At3g45590	ATSEN1 (SPLICING ENDONUCLEASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-11	69	Triticum aestivum	TaAffx.32069.4.A1_at	CA660872	-	-	1e+1	At4g05523	-	C.G.	S.X.	Please select
0.04	4e+0	30	Vitis vinifera	1618320_at	CB340841	-	-	8e+0	At3g51010	unknown protein	C.G.	S.X.	Please select
0.03	6e+0	30	Zea mays	Zm.6689.1.A1_s_at	BM381797	hypothetical protein LOC100272379	-	2e+1	At5g55125	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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