Gene omics information

Query gene ID	HU09E15u_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HU09E15u_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	S.X.	H.G.	Please select
0.91	98.1	HU09E15u_x_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	S.X.	H.G.	Please select
0.73	88.7	Contig19683_at	Contig19683	-	-	1e+0	At3g24820	BSD domain-containing protein	S.X.	H.G.	Please select
0.67	84.7	Contig19665_at	Contig19665	-	-	3e-1	At3g16820	F-box family protein	S.X.	H.G.	Please select
0.50	66.9	Contig26505_at	Contig26505	-	-	1e+0	At5g54300	unknown protein	S.X.	H.G.	Please select
0.46	61.0	rbags23g17_s_at	rbags23g17	-	-	3e-1	At3g46410	protein kinase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
23.1	99.8	GSM261064	Xantha s-46 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
17.3	99.6	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
12.2	99.4	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.0	99.2	GSM261041	Dicktoo-deacclimation-rep3	GSE10329	Low temperature stress in cv. Dicktoo
10.4	99.2	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
9.9	99.1	GSM160744	drought control rep2	GSE6990	Barley drought stress
8.7	98.9	GSM261058	Xantha b-12 Cotrol rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.5	98.8	GSM160815	drought control rep3	GSE6990	Barley drought stress
8.0	98.7	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo
7.1	98.4	GSM261030	Dicktoo-control-rep1	GSE10329	Low temperature stress in cv. Dicktoo

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	0	835	HU09E15u_x_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	C.G.	S.X.	Please select
0.05	1e-10	65	Contig2849_at	Contig2849	-	-	2e-1	At1g23170	unknown protein	C.G.	S.X.	Please select
0.03	3e-5	48	Contig1966_at	Contig1966	-	-	2e-1	At4g38320	HHP5 (heptahelical protein 5)	C.G.	S.X.	Please select
0.02	4e-4	44	Contig11496_at	Contig11496	-	-	5e-11	At1g23280	MAK16 protein-related	C.G.	S.X.	Please select
0.07	2e-3	42	HVSMEb0007C23r2_at	HVSMEb0007C23r2	-	-	1e+0	At5g24250	unknown protein	C.G.	S.X.	Please select
0.04	7e-3	40	Contig23267_at	Contig23267	-	-	5e+0	At3g03830	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.04	7e-3	40	Contig22100_at	Contig22100	-	-	9e-1	At2g23440	unknown protein	C.G.	S.X.	Please select
0.04	7e-3	40	Contig9615_at	Contig9615	-	-	1e+0	At1g35880	-	C.G.	S.X.	Please select
0.05	7e-3	40	Contig2389_at	Contig2389	-	-	5e+0	At5g38180	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At4g37090	829863	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.82109.1.S1_at	BI427452	-	-	2e-1	At5g66060	iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	C.G.	S.X.	Please select
0.03	4e-1	36	Oryza sativa	Os01g0185300	AK065131.1	-	Transferase family protein	2e-1	At3g21700	SGP2	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	5e+0	32	Populus trichocarpa	PtpAffx.212288.1.S1_at	pmrna24090	hypothetical protein	-	5e+0	At3g45590	ATSEN1 (SPLICING ENDONUCLEASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-11	69	Triticum aestivum	TaAffx.32069.4.A1_at	CA660872	-	-	1e+1	At4g05523	-	C.G.	S.X.	Please select
0.04	4e+0	30	Vitis vinifera	1618320_at	CB340841	-	-	8e+0	At3g51010	unknown protein	C.G.	S.X.	Please select
0.03	6e+0	30	Zea mays	Zm.6689.1.A1_s_at	BM381797	hypothetical protein LOC100272379	-	2e+1	At5g55125	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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