Gene omics information

Query gene ID	HT11N18r_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HT11N18r_s_at	HT11N18r	-	-	1e+0	At1g16025	unknown protein	S.X.	H.G.	Please select
0.83	94.0	Contig21626_at	Contig21626	-	-	4e+0	At5g59440	ZEU1 (ZEUS1)	S.X.	H.G.	Please select
0.80	92.5	Contig18_s_at	Contig18	-	-	8e-2	At5g25940	early nodulin-related	S.X.	H.G.	Please select
0.80	92.5	Contig24429_at	Contig24429	-	-	2e+0	At5g39220	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.67	84.7	Contig15721_at	Contig15721	-	-	1e+0	At5g59360	unknown protein	S.X.	H.G.	Please select
0.33	42.6	Contig9101_s_at	Contig9101	-	-	7e+0	At5g23930	mitochondrial transcription termination factor-related / mTERF-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
42.7	99.9	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
37.2	99.9	GSM398252	Martin_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
31.8	99.9	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
29.2	99.9	GSM398259	Martin_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
17.5	99.6	GSM398260	Martin_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.2	99.5	GSM398254	Martin_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.0	99.5	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
13.6	99.5	GSM398257	Martin_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.8	99.3	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
10.9	99.2	GSM161148	7% SWC rep3	GSE6990	Barley drought stress

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-1	34	Contig9946_at	Contig9946	-	-	8e+0	At5g12840	NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)	C.G.	S.X.	Please select
0.01	5e-1	34	Contig1483_at	Contig1483	-	-	3e-156	At4g33010	AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)	C.G.	S.X.	Please select
0.03	2e+0	32	HZ50B24r_s_at	HZ50B24r	-	-	7e-1	At1g12900	GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)	C.G.	S.X.	Please select
0.03	2e+0	32	HZ50B24r_at	HZ50B24r	-	-	7e-1	At1g12900	GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)	C.G.	S.X.	Please select
0.02	2e+0	32	Contig21686_at	Contig21686	-	-	2e-5	At3g26744	ICE1 (INDUCER OF CBF EXPRESSION 1)	C.G.	S.X.	Please select
0.03	2e+0	32	Contig24957_at	Contig24957	-	-	1e-3	At4g25790	allergen V5/Tpx-1-related family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig20506_at	Contig20506	-	-	1e-4	At2g44410	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.02	2e+0	32	Contig17017_at	Contig17017	-	-	3e-2	At1g61560	MLO6 (MILDEW RESISTANCE LOCUS O 6)	C.G.	S.X.	Please select
0.02	2e+0	32	Contig13551_at	Contig13551	-	-	5e-4	At1g22050	MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At1g16025	838173	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	36	Glycine max	HgAffx.16653.1.S1_at	CB280458	-	-	5e-1	At5g10570	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.07	7e-19	95	Oryza sativa	OsAffx.32152.2.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e-1	36	Populus trichocarpa	PtpAffx.134225.1.A1_at	CV243234	-	-	8e-1	At3g57860	UVI4-LIKE (UV-B-INSENSITIVE 4-LIKE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	2e-125	448	Triticum aestivum	TaAffx.76007.1.S1_at	CA731387	-	-	1e-1	At2g03440	nodulin-related	C.G.	S.X.	Please select
0.06	2e-2	38	Vitis vinifera	1611360_s_at	CF372855	hypothetical protein LOC100264047	-	8e+0	At5g54170	-	C.G.	S.X.	Please select
0.07	2e-21	101	Zea mays	Zm.463.1.A1_at	U95953.1	viviparous14	-	5e-6	At3g14440	NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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