Gene omics information

Query gene ID	HS18L03u_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	84.7	HS18L03u_at	HS18L03u	-	-	1e+1	At5g16880	VHS domain-containing protein / GAT domain-containing protein	S.X.	H.G.	Please select
0.80	92.5	Contig18_s_at	Contig18	-	-	8e-2	At5g25940	early nodulin-related	S.X.	H.G.	Please select
0.77	90.8	Contig21626_at	Contig21626	-	-	4e+0	At5g59440	ZEU1 (ZEUS1)	S.X.	H.G.	Please select
0.73	88.7	HT11N18r_s_at	HT11N18r	-	-	1e+0	At1g16025	unknown protein	S.X.	H.G.	Please select
0.71	87.1	Contig24429_at	Contig24429	-	-	2e+0	At5g39220	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.50	66.9	Contig15721_at	Contig15721	-	-	1e+0	At5g59360	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.7	99.8	GSM398257	Martin_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
23.8	99.8	GSM398256	Martin_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
23.5	99.8	GSM398255	Martin_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
20.9	99.7	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
17.5	99.6	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
15.8	99.6	GSM398252	Martin_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.1	99.5	GSM71139	OWB-D stress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
13.3	99.4	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
12.7	99.4	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
12.1	99.3	GSM398254	Martin_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	32	Contig11312_at	Contig11312	-	-	1e+1	At5g27050	AGL101	C.G.	S.X.	Please select
0.03	2e+0	32	Contig6242_at	Contig6242	-	-	8e-3	At5g05270	chalcone-flavanone isomerase family protein	C.G.	S.X.	Please select
0.02	7e+0	30	Contig6160_at	Contig6160	-	-	2e-31	At2g24765	ARF3 (ADP-RIBOSYLATION FACTOR 3)	C.G.	S.X.	Please select
0.02	7e+0	30	Contig5530_s_at	Contig5530	-	-	2e+0	At1g13370	histone H3, putative	C.G.	S.X.	Please select
0.03	7e+0	30	Contig24604_at	Contig24604	-	-	4e+0	At5g01910	unknown protein	C.G.	S.X.	Please select
0.01	7e+0	30	Contig5527_at	Contig5527	-	-	2e-4	At3g16910	AAE7 (ACYL-ACTIVATING ENZYME 7)	C.G.	S.X.	Please select
0.03	7e+0	30	EBma01_SQ005_G16_at	EBma01_SQ005_G16	-	-	3e+0	At2g01290	ribose-5-phosphate isomerase	C.G.	S.X.	Please select
0.03	7e+0	30	HW03I17u_at	HW03I17u	-	-	4e+0	At5g38760	unknown protein	C.G.	S.X.	Please select
0.02	7e+0	30	Contig1404_x_at	Contig1404	-	-	1e-2	At3g05180	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+1	30	Arabidopsis thaliana	At5g16880	831551	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e+0	32	Glycine max	GmaAffx.79624.1.S1_at	AI437547	-	-	1e-8	At3g50840	phototropic-responsive NPH3 family protein	C.G.	S.X.	Please select
0.04	7e+0	32	Oryza sativa	Os08g0126200	9636.m00237	-	-	2e-4	At3g50550	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	5e+0	32	Populus trichocarpa	PtpAffx.207153.1.S1_x_at	pmrna14187	hypothetical protein	-	7e-2	At5g57540	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.105295.1.S1_at	CA736561	-	-	3e+0	At5g62440	-	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1620701_at	CF415290	-	-	4e+0	At5g50930	DNA binding	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.406.9.A1_at	AI670512	-	-	1e+1	At5g16580	BGLU2 (BETA GLUCOSIDASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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