CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID HS09L05u_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 69.7 HS09L05u_at HS09L05u - - 4e+0 At5g45350 proline-rich family protein S.X. H.G.
0.44 58.9 Contig19672_at Contig19672 - - 5e-7 At3g09980 unknown protein S.X. H.G.
0.44 58.9 Contig4608_at Contig4608 - - 3e-9 At1g12840 DET3 (DE-ETIOLATED 3) S.X. H.G.
0.23 26.1 Contig20086_s_at Contig20086 - - 1e+0 At5g57570 - S.X. H.G.
0.20 21.1 Contig9680_at Contig9680 - - 6e-2 At3g23050 IAA7 (INDOLE-3-ACETIC ACID 7) S.X. H.G.
0.10 8.4 Contig2433_s_at Contig2433 - - 9e-9 At4g29260 acid phosphatase class B family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.0 99.5 GSM261071 Albina f-17 Hardened rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
12.2 99.4 GSM261072 Albina f-17 Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.1 98.9 GSM261065 Xantha s-46 Hardened rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.9 98.9 GSM261066 Xantha s-46 Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.7 98.6 GSM261078 Albina e-16 Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.1 98.4 GSM261077 Albina e-16 Hardened rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.3 98.1 GSM261073 Albina f-17 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.2 98.0 GSM261059 Xantha b-12 Hardened rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.0 97.9 GSM261060 Xantha b-12 Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.0 97.9 GSM261067 Xantha s-46 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.81 0 690 Contig3315_s_at Contig3315 - - 1e+0 At3g14190 unknown protein C.G. S.X.
0.81 0 690 Contig3315_at Contig3315 - - 1e+0 At3g14190 unknown protein C.G. S.X.
0.60 2e-139 494 HT07M06u_at HT07M06u - - 1e+0 At1g02870 unknown protein C.G. S.X.
0.75 4e-131 466 Contig3314_at Contig3314 - - 1e+0 At3g14190 unknown protein C.G. S.X.
0.16 9e-21 99 Contig3175_at Contig3175 - - 2e-3 At1g34750 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.19 2e-18 91 Contig3173_s_at Contig3173 - - 6e+0 At4g05091 unknown protein C.G. S.X.
0.19 2e-18 91 Contig3173_at Contig3173 - - 6e+0 At4g05091 unknown protein C.G. S.X.
0.03 2e-3 42 Contig19563_at Contig19563 - - 2e+0 At5g07640 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 4e-1 34 Contig10684_at Contig10684 - - 8e-17 At1g31780 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g45350 834571 proline-rich family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBFOVA - - - C.G. S.X.
0.09 1e-6 54 Glycine max Gma.6299.1.S1_at BQ080139 - - 3e-7 At3g05890 RCI2B (RARE-COLD-INDUCIBLE 2B) C.G. S.X.
0.21 4e-32 139 Oryza sativa Os05g0138300 AK119249.1 - Hydrophobic protein RCI2A (Low temperature andsalt responsive protein LTI6A) 5e-1 At5g01940 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein C.G. S.X.
0.15 8e-2 38 Populus trichocarpa PtpAffx.4286.14.S1_at CV256001 - - 1e-8 At3g05880 RCI2A (RARE-COLD-INDUCIBLE 2A) C.G. S.X.
0.51 2e-29 129 Triticum aestivum Ta.24724.2.S1_at CD872545 - - 4e-4 At2g38905 hydrophobic protein, putative / low temperature and salt responsive protein, putative C.G. S.X.
0.07 3e-1 34 Vitis vinifera 1614672_at CF204524.1 - - 3e-1 At4g18335 unknown protein C.G. S.X.
0.20 7e-6 50 Zea mays Zm.17762.1.S1_at CK369807 hydrophobic protein LTI6B - 4e-3 At3g05890 RCI2B (RARE-COLD-INDUCIBLE 2B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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