Gene omics information

Query gene ID HS09F06u_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1HS09F06u_atHS09F06u--3e-4At3g50330HEC2 (HECATE 2)S.X.H.G.
0.7388.7Contig443_atContig443--2e-8At4g27230HTA2 (histone H2A)S.X.H.G.
0.7388.7Contig4439_atContig4439--2e-10At2g33800ribosomal protein S5 family proteinS.X.H.G.
0.6784.7Contig2006_s_atContig2006--4e-26At3g46230ATHSP17.4S.X.H.G.
0.5066.9Contig18615_atContig18615--2e+0At1g55520TBP2 (TATA BINDING PROTEIN 2)S.X.H.G.
0.2021.1Contig17340_atContig17340--7e-9At3g06630protein kinase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
86.5100.0GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
37.099.9GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seeds
34.499.9GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
27.899.8GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
23.699.8GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
21.099.7GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
20.799.7GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
14.399.5GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
11.799.3GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
11.099.2GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.089e-650Contig20506_atContig20506--1e-4At2g44410protein binding / zinc ion bindingC.G.S.X.
0.036e-444Contig7646_atContig7646--9e-6At1g51590mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.032e-342Contig15975_atContig15975--4e-8At5g67110ALC (ALCATRAZ)C.G.S.X.
0.039e-340Contig11109_atContig11109--1e-10At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.019e-340Contig7226_atContig7226--2e-21At3g54540ATGCN4C.G.S.X.
0.024e-238Contig9522_atContig9522--5e-15At5g05630amino acid permease family proteinC.G.S.X.
0.034e-238Contig6690_atContig6690--2e+0At3g03920Gar1 RNA-binding region family proteinC.G.S.X.
0.024e-238Contig7429_s_atContig7429--5e-8At2g18162CPuORF1 (Conserved peptide upstream open reading frame 1)C.G.S.X.
0.024e-238Contig11806_atContig11806--1e-4At5g37200zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-446Arabidopsis thalianaAt3g50330824195HEC2 (HECATE 2)F:transcription factor activity, DNA binding;P:ovary septum development, transmitting tissue development, carpel formation, regulation of transcription;C:nucleus;P---C.G.S.X.
0.066e-342Glycine maxGma.17387.1.S1_atBG041746--9e-17At3g21330basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.203e-24113Oryza sativaOsAffx.5676.1.S1_at---0C.G.S.X.
0.041e-138Populus trichocarpaPtpAffx.217465.1.S1_s_atpmrna32734chalcone isomerase-like protein-5e-1At2g17670pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.047e-238Triticum aestivumTaAffx.105500.1.S1_atCA733406--3e-1At4g38930ubiquitin fusion degradation UFD1 family proteinC.G.S.X.
0.031e+032Vitis vinifera1615651_atBM436482--4e-1At5g39720AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN)C.G.S.X.
0.103e-857Zea maysZm.7386.1.S1_atBM334549DNA binding protein-1e-1At3g50330HEC2 (HECATE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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