Gene omics information

Query gene ID	HR01A09u_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HR01A09u_at	HR01A09u	-	-	2e+0	At5g55000	FIP2	S.X.	H.G.	Please select
0.80	92.5	Contig8468_at	Contig8468	-	-	1e-12	At4g33050	EDA39 (embryo sac development arrest 39)	S.X.	H.G.	Please select
0.67	84.7	Contig11154_at	Contig11154	-	-	1e-15	At5g66210	CPK28	S.X.	H.G.	Please select
0.53	69.7	Contig6325_at	Contig6325	-	-	4e-1	At5g25490	zinc finger (Ran-binding) family protein	S.X.	H.G.	Please select
0.40	53.1	Contig11957_at	Contig11957	-	-	5e-2	At3g48280	CYP71A25	S.X.	H.G.	Please select
0.29	35.5	Contig24268_at	Contig24268	-	-	2e+0	At5g57345	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.7	99.7	GSM372998	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.1	99.5	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.3	99.4	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.9	99.4	GSM372999	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.4	99.4	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.3	99.3	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.0	99.1	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.2	99.0	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.1	98.9	GSM372994	genotype: 11542 - pathogen isolates: K1 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.5	98.8	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-2	38	Contig11727_at	Contig11727	-	-	2e-10	At3g08840	D-alanine--D-alanine ligase family	C.G.	S.X.	Please select
0.03	1e+0	32	Contig18568_at	Contig18568	-	-	5e-1	At4g27710	CYP709B3	C.G.	S.X.	Please select
0.04	1e+0	32	Contig21492_at	Contig21492	-	-	4e+0	At3g58190	LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)	C.G.	S.X.	Please select
0.06	1e+0	32	HVSMEf0003G07r2_at	HVSMEf0003G07r2	-	-	5e-1	At1g58170	disease resistance-responsive protein-related / dirigent protein-related	C.G.	S.X.	Please select
0.01	5e+0	30	Contig9618_s_at	Contig9618	-	-	1e-5	At5g34850	PAP26 (PURPLE ACID PHOSPHATASE 26)	C.G.	S.X.	Please select
0.03	5e+0	30	HVSMEn0008I02r2_s_at	HVSMEn0008I02r2	-	-	1e+0	At3g19360	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.01	5e+0	30	Contig5912_at	Contig5912	-	-	1e-16	At1g60890	phosphatidylinositol-4-phosphate 5-kinase family protein	C.G.	S.X.	Please select
0.01	5e+0	30	Contig3734_at	Contig3734	-	-	4e-127	At1g80070	SUS2 (ABNORMAL SUSPENSOR 2)	C.G.	S.X.	Please select
0.01	5e+0	30	Contig3730_at	Contig3730	-	-	8e-63	At1g80070	SUS2 (ABNORMAL SUSPENSOR 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	32	Arabidopsis thaliana	At5g55000	835591	FIP2	FH protein interacting protein FIP2	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e+0	32	Glycine max	GmaAffx.27133.2.S1_at	BG238118	-	-	4e-3	At3g13230	RNA binding	C.G.	S.X.	Please select
0.06	5e+0	32	Oryza sativa	OsAffx.7697.2.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e-2	38	Populus trichocarpa	PtpAffx.50263.1.A1_at	CV252613	-	-	4e+0	At4g10920	KELP	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.34	8e-53	206	Triticum aestivum	TaAffx.2056.1.A1_at	CA640828	-	-	6e+0	At4g26510	ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase	C.G.	S.X.	Please select
0.04	3e+0	30	Vitis vinifera	1617488_at	CF210515	hypothetical protein LOC100256769	-	2e-1	At5g25090	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.05	4e+0	30	Zea mays	Zm.2255.1.S1_at	CF638097	-	-	2e+0	At4g30960	SIP3 (SOS3-INTERACTING PROTEIN 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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