Gene omics information

Query gene ID	HO10P07S_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	77.3	HO10P07S_at	HO10P07S	-	-	3e-2	At2g16505	-	S.X.	H.G.	Please select
0.67	84.7	Contig13690_at	Contig13690	-	-	3e-2	At5g28610	-	S.X.	H.G.	Please select
0.53	69.7	rbaal20i06_s_at	rbaal20i06	-	-	8e-3	At1g17650	GLYR2 (GLYOXYLATE REDUCTASE 2)	S.X.	H.G.	Please select
0.50	66.9	Contig9135_at	Contig9135	-	-	1e-42	At4g11820	MVA1	S.X.	H.G.	Please select
0.29	35.5	Contig11633_at	Contig11633	-	-	6e-1	At3g53650	histone H2B, putative	S.X.	H.G.	Please select
0.22	24.2	Contig11024_at	Contig11024	-	-	3e-10	At1g32550	ferredoxin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.7	98.9	GSM261058	Xantha b-12 Cotrol rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.3	98.8	GSM261030	Dicktoo-control-rep1	GSE10329	Low temperature stress in cv. Dicktoo
7.8	98.6	GSM363460	Control (C) - rep1	GSE14521	Late response to boron toxicity in barley leaves
7.3	98.5	GSM281748	Genotype: Morex - rep1	GSE11182	Steptoe x Morex seedling leaf comparison
6.9	98.3	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo
6.8	98.3	GSM281747	Genotype: Steptoe - rep3	GSE11182	Steptoe x Morex seedling leaf comparison
6.4	98.1	GSM372956	genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.9	97.9	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo
5.9	97.9	GSM281746	Genotype: Steptoe - rep2	GSE11182	Steptoe x Morex seedling leaf comparison
5.8	97.8	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-2	38	Contig19394_at	Contig19394	-	-	1e-2	At4g36270	ATP binding	C.G.	S.X.	Please select
0.02	2e-2	38	Contig7278_at	Contig7278	-	-	7e-2	At2g45980	unknown protein	C.G.	S.X.	Please select
0.03	6e-2	36	Contig8472_at	Contig8472	-	-	4e-11	At3g45100	SETH2	C.G.	S.X.	Please select
0.03	2e-1	34	Contig26462_at	Contig26462	-	-	4e-1	At5g18065	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	34	Contig13898_at	Contig13898	-	-	3e+0	At3g45820	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Contig9861_at	Contig9861	-	-	7e-1	At5g35900	LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35)	C.G.	S.X.	Please select
0.03	1e+0	32	Contig12629_s_at	Contig12629	-	-	6e-4	At1g16110	WAKL6 (wall associated kinase-like 6)	C.G.	S.X.	Please select
0.03	1e+0	32	Contig12629_at	Contig12629	-	-	6e-4	At1g16110	WAKL6 (wall associated kinase-like 6)	C.G.	S.X.	Please select
0.02	1e+0	32	Contig11216_at	Contig11216	-	-	9e-10	At3g11450	DNAJ heat shock N-terminal domain-containing protein / cell division protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-2	38	Arabidopsis thaliana	At2g16505	5007879	-	Encodes a Maternally expressed gene (MEG) family protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-1	36	Glycine max	Gma.8925.1.S1_at	BU763359	-	-	2e+0	At5g56800	-	C.G.	S.X.	Please select
0.07	1e+0	34	Oryza sativa	Os07g0450150	NM_187107.1	-	-	2e+0	At4g17785	MYB39 (myb domain protein 39)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	7e-1	34	Populus trichocarpa	PtpAffx.221813.1.S1_at	pmrna38875	hypothetical protein	-	3e+0	At4g36470	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	3e-21	101	Triticum aestivum	Ta.17878.1.S1_at	CK215268	-	-	3e-2	At5g08480	VQ motif-containing protein	C.G.	S.X.	Please select
0.05	2e+0	30	Vitis vinifera	1619645_at	CF202342.1	-	-	2e-1	At2g35850	unknown protein	C.G.	S.X.	Please select
0.05	3e+0	30	Zea mays	ZmAffx.19.1.A1_at	AI586648	PWWP domain containing protein	-	1e+1	At1g48745	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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