Gene omics information

Query gene ID	HO06A21S_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	72.0	HO06A21S_at	HO06A21S	-	-	1e-2	At2g44000	-	S.X.	H.G.	Please select
0.73	88.7	HV02H21u_at	HV02H21u	-	-	4e+0	At4g27900	-	S.X.	H.G.	Please select
0.73	88.7	Contig3281_s_at	Contig3281	-	-	2e-45	At5g57655	xylose isomerase family protein	S.X.	H.G.	Please select
0.67	84.7	HF11A03r_at	HF11A03r	-	-	2e-1	At3g61980	serine protease inhibitor, Kazal-type family protein	S.X.	H.G.	Please select
0.63	80.3	Contig22727_at	Contig22727	-	-	2e+0	At4g38630	RPN10 (REGULATORY PARTICLE NON-ATPASE 10)	S.X.	H.G.	Please select
0.50	66.9	Contig20816_at	Contig20816	-	-	1e-1	At4g36780	transcription regulator	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
53.6	100.0	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
51.0	99.9	GSM398250	Martin_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
27.8	99.8	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
20.5	99.7	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
19.9	99.7	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.0	99.5	GSM398265	HS41-1_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
12.7	99.4	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.0	99.1	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
9.8	99.1	GSM398252	Martin_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.3	99.0	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e-1	36	HVSMEa0011H12r2_x_at	HVSMEa0011H12r2	-	-	3e-2	At5g35680	eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative	C.G.	S.X.	Please select
0.05	1e-1	36	HU10M01u_x_at	HU10M01u	-	-	2e+1	At5g18748	unknown protein	C.G.	S.X.	Please select
0.03	1e-1	36	Contig14535_at	Contig14535	-	-	5e-1	At1g08830	CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1)	C.G.	S.X.	Please select
0.04	4e-1	34	HV_CEa0005J05r2_s_at	HV_CEa0005J05r2	-	-	5e-8	At2g34420	LHB1B2	C.G.	S.X.	Please select
0.02	4e-1	34	Contig9160_s_at	Contig9160	-	-	1e-41	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	C.G.	S.X.	Please select
0.02	4e-1	34	Contig9160_at	Contig9160	-	-	1e-41	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	C.G.	S.X.	Please select
0.03	4e-1	34	HV_CEa0014I08r2_s_at	HV_CEa0014I08r2	-	-	2e+1	At5g27238	-	C.G.	S.X.	Please select
0.01	4e-1	34	Contig4267_at	Contig4267	-	-	2e-8	At4g00830	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	4e-1	34	Contig10324_at	Contig10324	-	-	5e-33	At4g21800	QQT2 (quatre-quart2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-2	40	Arabidopsis thaliana	At2g44000	819005	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-2	40	Glycine max	GmaAffx.10164.2.S1_at	BQ273427	-	-	1e+0	At3g19000	oxidoreductase, 2OG-Fe(II) oxygenase family protein	C.G.	S.X.	Please select
0.04	4e-1	36	Oryza sativa	Os06g0714600	AU223447	-	Ras GTPase family protein	1e-2	At3g46830	ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	8e-2	38	Populus trichocarpa	PtpAffx.216616.1.S1_s_at	pmrna31519	hypothetical protein	-	6e+0	At2g02240	MEE66 (maternal effect embryo arrest 66)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	9e-1	34	Triticum aestivum	TaAffx.107539.1.S1_at	CA698231	-	-	2e-1	At3g06190	BPM2 (BTB-POZ AND MATH DOMAIN 2)	C.G.	S.X.	Please select
0.04	7e-2	36	Vitis vinifera	1610581_at	BQ798257	hypothetical protein LOC100249288	-	2e-14	At2g24395	chaperone protein dnaJ-related	C.G.	S.X.	Please select
0.03	4e-1	34	Zea mays	Zm.17115.1.S1_at	CN844978	-	-	1e+0	At5g67490	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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