Gene omics information

Query gene ID HO03I02S_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9498.9HO03I02S_atHO03I02S--3e+0At5g37850SOS4 (SALT OVERLY SENSITIVE 4)S.X.H.G.
0.3950.5Contig9840_atContig9840--7e-4At5g64970mitochondrial substrate carrier family proteinS.X.H.G.
0.3443.6HVSMEk0004M15r2_atHVSMEk0004M15r2--3e-1At4g27940mitochondrial substrate carrier family proteinS.X.H.G.
0.3342.6Contig15154_atContig15154--6e-3At2g42700-S.X.H.G.
0.3240.3Contig21040_atContig21040--2e+0At5g12390FIS1B (FISSION 1B)S.X.H.G.
0.3138.6Contig16932_atContig16932--6e-1At3g17030-S.X.H.G.
0.2935.5Contig19489_atContig19489--1e+0At3g23171unknown proteinS.X.H.G.
0.2935.5Contig3707_atContig3707--1e-23At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinS.X.H.G.
0.2630.4Contig14608_atContig14608--4e-1At1g73990SPPAS.X.H.G.
0.2528.9Contig8323_atContig8323--3e+0Atmg00890-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.199.2GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
9.198.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.998.7GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.097.9GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.396.4GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.096.0GSM6890227 h control replicate 2GSE3097Barley1 salinity stress study
3.795.5GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.595.1GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.494.8GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-134Contig6214_atContig6214--2e-1At3g50930BCS1 (CYTOCHROME BC1 SYNTHESIS)C.G.S.X.
0.032e+032Contig26226_atContig26226--1e-13At1g36160ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)C.G.S.X.
0.032e+032Contig21328_atContig21328--4e+0At5g44570unknown proteinC.G.S.X.
0.022e+032Contig2318_s_atContig2318--2e+0At5g4004060S acidic ribosomal protein P2 (RPP2E)C.G.S.X.
0.022e+032Contig2318_atContig2318--2e+0At5g4004060S acidic ribosomal protein P2 (RPP2E)C.G.S.X.
0.036e+030Contig8737_atContig8737--2e-11At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
0.016e+030Contig5347_atContig5347--1e-3At1g17770SUVH7 (SU(VAR)3-9 HOMOLOG 7)C.G.S.X.
0.036e+030Contig18459_atContig18459--1e+0At1g71470unknown proteinC.G.S.X.
0.026e+030Contig16043_atContig16043--1e-7At3g27120ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+032Arabidopsis thalianaAt5g37850833763SOS4 (SALT OVERLY SENSITIVE 4)Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.---C.G.S.X.
0.043e-136Glycine maxGma.10558.1.A1_atBI426462--8e-1At5g15750RNA-binding S4 domain-containing proteinC.G.S.X.
0.056e+032Oryza sativaOsAffx.28748.1.S1_at---0C.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.61266.1.S1_atBU893006--4e+0At3g59455-C.G.S.X.
0.053e+032Triticum aestivumTa.11019.1.A1_atBQ168388--3e-1At5g14530transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.042e-134Vitis vinifera1617927_atCB977453--2e+1Atcg00160-C.G.S.X.
0.042e+128Zea maysZmAffx.228.1.A1_atAI670240--5e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage