Gene omics information

Query gene ID	HM14B07r_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.92	98.4	HM14B07r_at	HM14B07r	-	-	5e+0	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	S.X.	H.G.	Please select
0.33	42.6	Contig11527_at	Contig11527	-	-	1e+0	At1g76930	ATEXT4 (EXTENSIN 4)	S.X.	H.G.	Please select
0.29	35.5	Contig21356_at	Contig21356	-	-	1e+0	At1g18265	unknown protein	S.X.	H.G.	Please select
0.26	30.4	Contig19967_at	Contig19967	-	-	1e+0	At2g33850	unknown protein	S.X.	H.G.	Please select
0.22	24.2	Contig16521_at	Contig16521	-	-	1e-1	At1g74260	PUR4 (purine biosynthesis 4)	S.X.	H.G.	Please select
0.19	19.6	Contig24133_at	Contig24133	-	-	2e+0	At5g13020	emsy N terminus domain-containing protein / ENT domain-containing protein	S.X.	H.G.	Please select
0.17	16.9	Contig11528_s_at	Contig11528	-	-	4e-1	At5g44570	unknown protein	S.X.	H.G.	Please select
0.17	16.9	Contig19845_at	Contig19845	-	-	4e-4	At3g22750	protein kinase, putative	S.X.	H.G.	Please select
0.13	11.6	Contig6747_at	Contig6747	-	-	1e-48	At1g63830	proline-rich family protein	S.X.	H.G.	Please select
0.12	10.4	Contig8129_at	Contig8129	-	-	5e-1	At1g23145	RALFL2 (RALF-LIKE 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.6	99.3	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
11.3	99.3	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
10.0	99.1	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
8.0	98.7	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
7.5	98.6	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
7.1	98.4	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
6.5	98.2	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.9	97.9	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2	97.4	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.0	97.2	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	32	Contig12524_at	Contig12524	-	-	5e-1	At1g05310	pectinesterase family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig11558_at	Contig11558	-	-	1e+0	At1g33270	patatin-related	C.G.	S.X.	Please select
0.03	2e+0	32	rbah36k01_s_at	rbah36k01	-	-	1e+0	At3g04430	anac049 (Arabidopsis NAC domain containing protein 49)	C.G.	S.X.	Please select
0.03	2e+0	32	HF17L22r_at	HF17L22r	-	-	9e-1	At1g33270	patatin-related	C.G.	S.X.	Please select
0.03	2e+0	32	HU05M05u_s_at	HU05M05u	-	-	1e+0	At5g18810	SCL28	C.G.	S.X.	Please select
0.01	2e+0	32	Contig821_at	Contig821	-	-	7e-2	At4g20810	transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig20013_at	Contig20013	-	-	2e-2	At4g17440	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig11558_s_at	Contig11558	-	-	1e+0	At1g33270	patatin-related	C.G.	S.X.	Please select
0.02	2e+0	32	Contig22828_at	Contig22828	-	-	5e-1	At1g29620	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e+0	32	Arabidopsis thaliana	At4g35950	829750	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	A member of ROP GTPases gene family-like. GTP binding protein Arac6.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	GmaAffx.29596.1.A1_at	CD400742	-	-	2e-1	At2g16860	GCIP-interacting family protein	C.G.	S.X.	Please select
0.03	9e+0	32	Oryza sativa	OsAffx.8319.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.212251.1.S1_at	pmrna24014	hypothetical protein	-	2e-26	At1g26780	myb family transcription factor (MYB117)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	8e-2	38	Triticum aestivum	Ta.7315.1.A1_at	BJ261216	-	-	3e-1	At5g40670	PQ-loop repeat family protein / transmembrane family protein	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1615298_s_at	BQ793084	-	-	9e-1	At2g43910	thiol methyltransferase, putative	C.G.	S.X.	Please select
0.04	8e+0	30	Zea mays	ZmAffx.1090.1.A1_at	AW065404	-	-	1e+1	At3g57958	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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