Gene omics information

Query gene ID HM04D16u_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5369.7HM04D16u_s_atHM04D16u--3e+0At5g10400histone H3S.X.H.G.
0.6784.7Contig7205_atContig7205--2e-2At2g32550rcd1-like cell differentiation family proteinS.X.H.G.
0.4762.2Contig3334_atContig3334--2e-53At3g53610ATRAB8S.X.H.G.
0.4458.9Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.4053.1Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.2935.5Contig12140_atContig12140--4e+0At5g54440unknown proteinS.X.H.G.
0.2732.1Contig5749_atContig5749--6e-16At2g25310carbohydrate bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.7GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.798.6GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
6.798.3GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.698.2GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.598.2GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.498.1GSM282021Malting_day4_Legacy_rep 2GSE11200Expression data from malting barley seeds
5.797.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.297.4GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.796.9GSM282020Malting_day4_Legacy_rep 3GSE11200Expression data from malting barley seeds
4.496.6GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.540648Contig9095_atContig9095--2e+0At1g29380-C.G.S.X.
0.144e-1373HV_CEb0011D15r2_s_atHV_CEb0011D15r2--1e-6At5g47870unknown proteinC.G.S.X.
0.084e-1373Contig10439_atContig10439--1e-8At5g47870unknown proteinC.G.S.X.
0.021e+032Contig8945_atContig8945--7e-1At4g11250AGL52C.G.S.X.
0.021e+032Mla12DH_orf_3pri12_s_atMla12DH_orf_3pri12--6e-1At4g2362050S ribosomal protein-relatedC.G.S.X.
0.021e+032Mla12DH_orf_3pri12_atMla12DH_orf_3pri12--6e-1At4g2362050S ribosomal protein-relatedC.G.S.X.
0.041e+032EBpi01_SQ004_K18_atEBpi01_SQ004_K18--3e+0At5g35525unknown proteinC.G.S.X.
0.031e+032Contig15187_atContig15187--2e-2At4g32590ferredoxin-relatedC.G.S.X.
0.035e+030Contig25353_atContig25353--1e+0At4g18470SNI1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt5g10400830904histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO---C.G.S.X.
0.044e+032Glycine maxGmaAffx.14376.1.S1_atBM188772microsomal omega-3 fatty acid desaturase /// microsomal omega-3 fatty acid desaturase-9e-4At2g29980FAD3 (FATTY ACID DESATURASE 3)C.G.S.X.
0.171e-1067Oryza sativaOs09g0512800AA753646-Conserved hypothetical protein2e-1At2g21510DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.042e+130Populus trichocarpaPtpAffx.88082.1.A1_atCV270475hypothetical protein-5e+0At5g15420unknown proteinC.G.S.X.
0.625e-88323Triticum aestivumTaAffx.68435.1.S1_atCA629716--2e+1At5g17847unknown proteinC.G.S.X.
0.048e-132Vitis vinifera1611787_atBQ793628similar to C2 domain-containing protein / GRAM domain-containing protein-3e+0At4g16141sequence-specific DNA binding / transcription factor/ zinc ion bindingC.G.S.X.
0.126e-24109Zea maysZm.9440.1.A1_atCF635755snRK1-interacting protein 1-3e-14At5g47870unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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