Gene omics information

Query gene ID	HG01J06u_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	78.7	HG01J06u_at	HG01J06u	-	-	5e+0	At4g24600	unknown protein	S.X.	H.G.	Please select
0.80	92.5	HO11K23S_s_at	HO11K23S	-	-	4e+0	At3g17420	GPK1	S.X.	H.G.	Please select
0.73	88.7	Contig18430_at	Contig18430	-	-	2e-2	At1g18340	basal transcription factor complex subunit-related	S.X.	H.G.	Please select
0.71	87.1	Contig20065_at	Contig20065	-	-	4e-1	At4g11600	ATGPX6 (GLUTATHIONE PEROXIDASE 6)	S.X.	H.G.	Please select
0.70	86.0	Contig3565_s_at	Contig3565	-	-	2e-1	At4g01430	nodulin MtN21 family protein	S.X.	H.G.	Please select
0.70	86.0	Contig7635_s_at	Contig7635	-	-	3e-1	At5g42630	ATS (ABERRANT TESTA SHAPE)	S.X.	H.G.	Please select
0.56	74.3	HP01O07w_at	HP01O07w	-	-	3e+0	At5g16490	RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)	S.X.	H.G.	Please select
0.56	74.3	Contig6960_at	Contig6960	-	-	1e+0	At4g29770	-	S.X.	H.G.	Please select
0.53	69.7	Contig13565_at	Contig13565	-	-	9e+0	At4g29770	-	S.X.	H.G.	Please select
0.50	66.9	HVSMEb0005F19r2_at	HVSMEb0005F19r2	-	-	3e-1	At4g09010	APX4 (ASCORBATE PEROXIDASE 4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.8	99.6	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.5	99.5	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.8	99.5	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.5	99.5	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.9	99.2	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.5	99.0	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.3	99.0	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.3	99.0	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.8	98.9	GSM372951	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.1	98.7	GSM372946	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	9e-74	276	Contig23771_at	Contig23771	-	-	1e-3	At1g54820	protein kinase family protein	C.G.	S.X.	Please select
0.48	7e-56	216	HV_CEa0002A03r2_at	HV_CEa0002A03r2	-	-	8e+0	At4g23080	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	34	Contig19492_at	Contig19492	-	-	5e-1	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	C.G.	S.X.	Please select
0.03	2e+0	32	HVSMEk0010J24r2_at	HVSMEk0010J24r2	-	-	1e+0	At3g23180	-	C.G.	S.X.	Please select
0.03	2e+0	32	Contig26011_at	Contig26011	-	-	1e+0	At4g04925	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Contig24924_at	Contig24924	-	-	4e+0	At4g02430	pre-mRNA splicing factor, putative / SR1 protein, putative	C.G.	S.X.	Please select
0.01	2e+0	32	Contig10183_at	Contig10183	-	-	3e+0	At4g32710	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	C.G.	S.X.	Please select
0.02	2e+0	32	Contig20373_at	Contig20373	-	-	2e-9	At4g28710	XIH	C.G.	S.X.	Please select
0.02	2e+0	32	Contig12222_at	Contig12222	NBS-LRR disease resistance protein homologue	-	7e-1	At4g26470	calcium ion binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e+0	32	Arabidopsis thaliana	At4g24600	828562	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	7e-3	42	Glycine max	Gma.8125.1.S1_at	BU548461	-	-	4e-3	At5g39030	protein kinase family protein	C.G.	S.X.	Please select
0.12	2e-16	87	Oryza sativa	Os.27011.1.A1_s_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	7e-6	52	Populus trichocarpa	PtpAffx.224983.1.S1_s_at	pmrna43944	hypothetical protein	-	5e-7	At5g38280	PR5K	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.18	5e-9	61	Triticum aestivum	TaAffx.66712.1.S1_at	BG905696	-	-	8e-5	At5g38280	PR5K	C.G.	S.X.	Please select
0.04	3e-1	34	Vitis vinifera	1612106_at	CB981251	-	-	3e+0	At4g24600	unknown protein	C.G.	S.X.	Please select
0.03	8e+0	30	Zea mays	ZmAffx.1188.1.A1_at	BE025244	-	-	3e+0	At5g46620	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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