CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID HF17H18r_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 77.3 HF17H18r_s_at HF17H18r - - 3e+0 At4g03410 peroxisomal membrane protein-related S.X. H.G.
0.63 80.3 Contig4260_at Contig4260 - - 5e-2 At4g37980 ELI3-1 (ELICITOR-ACTIVATED GENE 3-1) S.X. H.G.
0.55 72.0 EBem09_SQ001_L06_s_at EBem09_SQ001_L06 - - 5e-1 At5g16470 zinc finger (C2H2 type) family protein S.X. H.G.
0.53 69.7 Contig2783_s_at Contig2783 - - 5e+0 At5g01870 lipid transfer protein, putative S.X. H.G.
0.47 62.2 HY08D02u_s_at HY08D02u - - 6e+0 At2g31180 MYB14 (MYB DOMAIN PROTEIN 14) S.X. H.G.
0.39 50.5 Contig14901_at Contig14901 - - 1e+0 At1g24060 unknown protein S.X. H.G.
0.39 50.5 HT06G21u_s_at HT06G21u - - 1e-8 At2g36530 LOS2 S.X. H.G.
0.36 47.1 HA26O09r_s_at HA26O09r - - 6e+0 At3g52780 PAP20 S.X. H.G.
0.36 47.1 Contig9459_at Contig9459 - - 1e-2 At5g54800 GPT1 S.X. H.G.
0.26 30.4 Contig16073_at Contig16073 - - 3e-2 At5g37200 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 97.1 GSM238409 Pericarp 4DAF; seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
3.9 95.8 GSM440967 Stressed palea_Rep2 GSE17669 Gene expression in the barley spike during drought stress
3.8 95.7 GSM419972 Lemma_Rep1 GSE16754 Comparative transcriptional profiling of organs of the barley spike
3.8 95.7 GSM440957 Control lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
3.5 95.1 GSM238411 Pericarp 8DAF; seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
3.3 94.6 GSM146379 Maythorpe shoot Salt, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.3 94.6 GSM419978 Awn_Rep1 GSE16754 Comparative transcriptional profiling of organs of the barley spike
3.3 94.6 GSM440969 Control awn_Rep1 GSE17669 Gene expression in the barley spike during drought stress
3.3 94.6 GSM440960 Stressed lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
3.0 93.8 GSM440962 Stressed lemma_Rep3 GSE17669 Gene expression in the barley spike during drought stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 9e-98 355 Contig1361_at Contig1361 - - 3e-1 At4g02340 epoxide hydrolase, putative C.G. S.X.
0.50 9e-67 252 HW01F21u_at HW01F21u - - 6e+0 At1g07901 unknown protein C.G. S.X.
0.39 3e-51 200 HY10O14u_x_at HY10O14u - - 6e-2 At2g47270 transcription factor/ transcription regulator C.G. S.X.
0.19 8e-21 99 HC111A11_T3_at HC111A11_T3 - - 2e-5 At4g34870 ROC5 (ROTAMASE CYCLOPHILIN 5) C.G. S.X.
0.18 2e-15 81 Contig8382_at Contig8382 - - 3e-2 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.18 2e-15 81 Contig8383_s_at Contig8383 - - 3e-2 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.04 7e-6 50 Contig9130_at Contig9130 - - 2e-4 At1g01940 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.03 2e-3 42 Contig3457_x_at Contig3457 - - 3e-43 At4g25630 FIB2 (FIBRILLARIN 2) C.G. S.X.
0.03 2e-3 42 Contig3457_at Contig3457 - - 3e-43 At4g25630 FIB2 (FIBRILLARIN 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At4g03410 827932 peroxisomal membrane protein-related F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MFPO - - - C.G. S.X.
0.19 2e-18 93 Glycine max PsAffx.CL74Contig1_at PsAffx.CL74Contig1 - - 4e-16 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.23 5e-16 85 Oryza sativa Os.54446.1.S1_at - - - 0 C.G. S.X.
0.09 8e-5 48 Populus trichocarpa PtpAffx.123070.1.A1_s_at CK093879 - - 7e-1 At2g21130 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase C.G. S.X.
0.47 7e-57 220 Triticum aestivum Ta.1078.2.S1_a_at BJ252383 Cyclophilin - 8e-6 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.22 2e-20 97 Vitis vinifera 1609132_at CA814100 - - 1e+0 At2g29960 CYP5 (CYCLOPHILIN 5) C.G. S.X.
0.33 3e-32 137 Zea mays Zm.889.3.S1_at AI834601 - - 3e-4 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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