Gene omics information

Query gene ID	HF11A03r_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	84.7	HF11A03r_at	HF11A03r	-	-	2e-1	At3g61980	serine protease inhibitor, Kazal-type family protein	S.X.	H.G.	Please select
0.73	88.7	HV02H21u_at	HV02H21u	-	-	4e+0	At4g27900	-	S.X.	H.G.	Please select
0.73	88.7	Contig3281_s_at	Contig3281	-	-	2e-45	At5g57655	xylose isomerase family protein	S.X.	H.G.	Please select
0.63	80.3	Contig22727_at	Contig22727	-	-	2e+0	At4g38630	RPN10 (REGULATORY PARTICLE NON-ATPASE 10)	S.X.	H.G.	Please select
0.55	72.0	HO06A21S_at	HO06A21S	-	-	1e-2	At2g44000	-	S.X.	H.G.	Please select
0.50	66.9	Contig20816_at	Contig20816	-	-	1e-1	At4g36780	transcription regulator	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
101.6	100.0	GSM398250	Martin_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
32.4	99.9	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
29.5	99.9	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
26.9	99.8	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
19.0	99.7	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
15.4	99.6	GSM130800	control, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
14.5	99.5	GSM130804	JA, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
12.5	99.4	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
9.6	99.0	GSM398266	HS41-1_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.3	98.5	GSM238420	Endosperm 0 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	9e-5	46	HD07M18r_at	HD07M18r	-	-	7e-1	At3g29370	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Contig10245_at	Contig10245	-	-	2e+0	At1g34000	OHP2 (ONE-HELIX PROTEIN 2)	C.G.	S.X.	Please select
0.03	1e+0	32	Contig18775_at	Contig18775	-	-	2e+0	At1g43790	TED6 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6)	C.G.	S.X.	Please select
0.03	1e+0	32	rbaal39o21_at	rbaal39o21	-	-	4e-4	At1g29820	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	30	Contig7377_s_at	Contig7377	-	-	1e-1	At2g25810	TIP4	C.G.	S.X.	Please select
0.04	6e+0	30	HU11J20u_at	HU11J20u	-	-	4e+0	At3g09940	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	C.G.	S.X.	Please select
0.03	6e+0	30	Contig17341_at	Contig17341	-	-	9e-2	At1g14345	oxidoreductase	C.G.	S.X.	Please select
0.03	6e+0	30	Contig15593_at	Contig15593	-	-	2e+0	At2g46000	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	30	Contig5202_at	Contig5202	-	-	2e-62	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	2e-1	36	Arabidopsis thaliana	At3g61980	825371	serine protease inhibitor, Kazal-type family protein	F:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:plasma membrane, anchored to membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.46426.1.S1_at	BM524901	-	-	3e-3	At1g02010	SEC1A (SIMILAR TO ELECTRON CAREER 1A)	C.G.	S.X.	Please select
0.04	6e+0	32	Oryza sativa	Os04g0307800	9632.m02265	-	-	8e-1	At4g01500	NGA4 (NGATHA4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	Ptp.6224.1.S1_at	DN500515	hypothetical protein	-	4e-3	At2g43795	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	3e-3	42	Triticum aestivum	TaAffx.110026.1.S1_at	CA665245	-	-	3e-1	At4g10700	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	30	Vitis vinifera	1621332_at	CB347271	-	-	2e+1	At5g53030	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	34	Zea mays	Zm.10586.1.A1_at	BQ538465	hypothetical protein LOC100191582	-	5e-2	At3g51100	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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