Gene omics information

Query gene ID HD01C23w_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1HD01C23w_atHD01C23w--1e+0At3g15270SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)S.X.H.G.
0.1210.4Contig16107_atContig16107--2e+0At3g09980unknown proteinS.X.H.G.
0.108.4Contig20907_atContig20907--2e+0At4g18425unknown proteinS.X.H.G.
0.043.4rbags21n02_atrbags21n02--3e-1At2g46680ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)S.X.H.G.
0.043.4Contig15346_atContig15346--4e+0At4g17040ATP-dependent Clp protease proteolytic subunit, putativeS.X.H.G.
0.021.8HVSMEg0005C14r2_atHVSMEg0005C14r2--1e+1At4g19770glycosyl hydrolase family 18 proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.899.1GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.198.7GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.098.7GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.498.5GSM261052Bonus Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.698.2GSM398265HS41-1_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.598.2GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
6.498.1GSM261058Xantha b-12 Cotrol rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.097.9GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.497.5GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.297.4GSM3634635 mM B(OH)3 treatment (5B) - rep1GSE14521Late response to boron toxicity in barley leaves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.331e-137488Contig15921_atContig15921--3e+1At5g63905unknown proteinC.G.S.X.
0.347e-47186HVSMEl0007F21r2_s_atHVSMEl0007F21r2--4e+0At5g48080-C.G.S.X.
0.347e-47186HVSMEl0007F21r2_atHVSMEl0007F21r2--4e+0At5g48080-C.G.S.X.
0.122e-25115HVSMEn0009B02r2_atHVSMEn0009B02r2--9e+0At5g63905unknown proteinC.G.S.X.
0.023e+032Contig17794_atContig17794--3e-9At2g30700unknown proteinC.G.S.X.
0.013e+032Contig7604_atContig7604--3e-22At4g11030long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putativeC.G.S.X.
0.033e+032EBro03_SQ003_E18_s_atEBro03_SQ003_E18--4e-22At2g26140ftsh4 (FtsH protease 4)C.G.S.X.
0.013e+032Contig3614_atContig3614--5e-2At5g38470DNA repair protein RAD23, putativeC.G.S.X.
0.013e+032AF085166_x_atAF085166--1e+0At5g02070protein kinase-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt3g15270820758SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.---C.G.S.X.
0.035e-136Glycine maxGma.12964.1.A1_atCD397689--1e+1Atmg01140-C.G.S.X.
0.043e-963Oryza sativaOs05g0121800AK101222.1--3e-7At5g23950C2 domain-containing proteinC.G.S.X.
0.038e+032Populus trichocarpaPtpAffx.49889.1.A1_s_atCA821415hypothetical protein-4e+0At1g54700-C.G.S.X.
0.036e+032Triticum aestivumTaAffx.115999.1.A1_atBQ826577--7e-1At3g19660unknown proteinC.G.S.X.
0.032e+032Vitis vinifera1616862_atCB343429hypothetical protein LOC100250930-1e+0At2g19385zinc ion bindingC.G.S.X.
0.022e+032Zea maysZm.18257.1.S1_atCN845413--2e+0At2g26310chalcone isomeraseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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