Gene omics information

Query gene ID	HB18P10r_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HB18P10r_at	HB18P10r	-	-	3e+0	At1g11850	unknown protein	S.X.	H.G.	Please select
0.36	47.1	Contig4072_at	Contig4072	-	-	2e+0	At2g31610	40S ribosomal protein S3 (RPS3A)	S.X.	H.G.	Please select
0.36	47.1	Contig30_s_at	Contig30	-	-	4e-19	At5g59690	histone H4	S.X.	H.G.	Please select
0.23	26.1	Contig3806_s_at	Contig3806	-	-	1e-3	At2g43710	SSI2	S.X.	H.G.	Please select
0.15	14.1	Contig20549_at	Contig20549	-	-	2e-27	At2g39480	PGP6 (P-GLYCOPROTEIN 6)	S.X.	H.G.	Please select
0.05	4.1	Contig13652_at	Contig13652	-	-	8e-7	At1g32090	early-responsive to dehydration protein-related / ERD protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
43.5	99.9	GSM261029	ABA-Late-rep3	GSE10328	ABA experiment
21.1	99.7	GSM161200	cold treatment rep1	GSE6993	Barley low temperature stress
14.0	99.5	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
14.0	99.5	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
13.8	99.5	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.6	99.0	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.9	98.9	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.4	98.5	GSM161221	cold treatment rep3	GSE6993	Barley low temperature stress
7.4	98.5	GSM372970	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.6	98.2	GSM261054	Bonus Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.23	2e-116	416	Contig5110_at	Contig5110	nucellin-like aspartic protease-like	-	2e-2	At4g33490	aspartic-type endopeptidase	C.G.	S.X.	Please select
0.70	7e-101	365	HU09D18u_s_at	HU09D18u	nucellin-like aspartic protease-like	-	3e+0	At3g50460	HR2 (HOMOLOG OF RPW8 2)	C.G.	S.X.	Please select
0.03	3e-1	34	Contig16346_at	Contig16346	-	-	5e-1	At3g45050	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	34	Contig17504_at	Contig17504	-	-	4e-1	At1g52660	ATP binding	C.G.	S.X.	Please select
0.02	3e-1	34	Contig10466_at	Contig10466	glycosyltransferase	-	1e+1	At4g31020	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Contig6430_at	Contig6430	-	-	3e-4	At5g43430	ETFBETA	C.G.	S.X.	Please select
0.03	1e+0	32	Contig20646_at	Contig20646	-	-	8e-2	At2g19270	-	C.G.	S.X.	Please select
0.03	1e+0	32	Contig6430_s_at	Contig6430	-	-	3e-4	At5g43430	ETFBETA	C.G.	S.X.	Please select
0.01	5e+0	30	Contig3608_at	Contig3608	-	-	7e-20	At3g47520	MDH (MALATE DEHYDROGENASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e+0	32	Arabidopsis thaliana	At1g11850	837732	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e-2	38	Glycine max	GmaAffx.93210.1.S1_at	CF808935	-	-	7e-11	At5g59240	40S ribosomal protein S8 (RPS8B)	C.G.	S.X.	Please select
Os02g0731801	0	Os11g0596500	Oryza sativa	Os01g0581500	-	-	-	0			C.G.	S.X.	Please select
0.04	1e+1	30	Populus trichocarpa	PtpAffx.86908.1.S1_at	DN494910	hypothetical protein	-	1e+0	At5g28610	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.43	3e-34	145	Triticum aestivum	Ta.564.1.S1_x_at	BJ249353	-	-	5e+0	At1g70810	C2 domain-containing protein	C.G.	S.X.	Please select
0.04	3e+0	30	Vitis vinifera	1609550_s_at	CB974840	hypothetical protein LOC100257178	-	1e-21	At5g20290	40S ribosomal protein S8 (RPS8A)	C.G.	S.X.	Please select
0.06	1e+0	32	Zea mays	ZmAffx.1370.1.S1_at	11990232-98	-	-	5e+0	At5g42955	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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