Gene omics information

Query gene ID	GmaAffx.93627.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.82	91.9	GmaAffx.93627.1.S1_s_at	CF809352	-	-	2e-44	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	S.X.	H.G.	Please select
0.63	82.9	Gma.12601.1.S1_at	CD392236	-	-	6e-50	At5g67320	HOS15 (high expression of osmotically responsive genes 15)	S.X.	H.G.	Please select
0.60	80.7	Gma.8652.1.A1_at	CD407809	-	-	3e-1	At1g48160	signal recognition particle 19 kDa protein, putative / SRP19, putative	S.X.	H.G.	Please select
0.59	79.5	Gma.4136.1.S1_at	BE824037	-	-	4e-20	At5g05230	ubiquitin-protein ligase	S.X.	H.G.	Please select
0.59	79.5	Gma.12593.1.S1_a_at	BE823660	-	-	6e-9	At2g32170	-	S.X.	H.G.	Please select
0.56	78.2	Gma.8066.1.A1_at	BQ611504	-	-	1e-1	At1g54170	CID3 (CTC-Interacting Domain 3)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.55686.1.S1_at	BI970602	-	-	7e-7	At5g43560	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.69858.1.A1_at	BU547559	-	-	5e+0	At5g48080	-	S.X.	H.G.	Please select
0.44	63.3	Gma.13242.1.S1_at	CD396483	NAC domain protein	-	1e-5	At5g64060	anac103 (Arabidopsis NAC domain containing protein 103)	S.X.	H.G.	Please select
0.43	60.6	Gma.8340.1.S1_at	AW201258	-	-	3e-3	At1g72390	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.7	99.0	GSM293126	3_C038.1O.R9O1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.2	98.9	GSM292373	47_C104.1F.R9F3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.0	98.5	GSM292211	74-C018.1A.R9A3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM293127	40_1148.1O.R093P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM292575	85_C136.1H.R9H2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2	98.1	GSM292768	30_C198.1K.R9K3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1	98.1	GSM292158	10_C010.1A.R9A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM292221	15_C026.1B.SLB2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM293789	33_3058.2D.R9D1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.61	0	787	Gma.8392.1.S1_at	AW349304	-	-	3e-67	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	C.G.	S.X.	Please select
0.56	2e-100	365	Gma.10074.1.S1_at	CD414448	-	-	1e-62	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	C.G.	S.X.	Please select
0.04	1e+0	34	Gma.720.2.S1_at	BG509704	-	-	3e+0	At1g26670	VTI1B	C.G.	S.X.	Please select
0.01	4e+0	32	PsAffx.C93000053_at	PsAffx.C93000053	-	-	5e+0	At2g36300	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.00	4e+0	32	PsAffx.C188000025_at	PsAffx.C188000025	-	-	3e-1	At3g17800	-	C.G.	S.X.	Please select
0.01	4e+0	32	PsAffx.C158000029_at	PsAffx.C158000029	-	-	3e-1	At2g44525	unknown protein	C.G.	S.X.	Please select
0.02	4e+0	32	GmaAffx.79122.1.S1_at	AW350698	-	-	2e+0	At3g01400	armadillo/beta-catenin repeat family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Gma.720.1.S1_at	CD396523	-	-	2e-31	At4g26670	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select
0.03	4e+0	32	Gma.7152.1.S1_at	AW100809	-	-	4e-23	At3g05840	ATSK12	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	2e-44	178	Arabidopsis thaliana	At5g18620	831980	CHR17 (CHROMATIN REMODELING FACTOR17)	F:in 7 functions;P:ATP-dependent chromatin remodeling, chromatin remodeling;C:nucleus, chromatin remodeling complex;MOFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.15	3e-14	77	Hordeum vulgare	Contig8654_at	Contig8654	-	-	3e-90	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	C.G.	S.X.	Please select
0.10	3e-45	182	Oryza sativa	Os05g0150300	AK100732.1	-	Possible global transcription activator SNF2L1	1e-125	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.33	2e-60	232	Populus trichocarpa	PtpAffx.208378.1.S1_at	pmrna16663	hypothetical protein	-	2e-133	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	2e-17	89	Triticum aestivum	Ta.3492.1.A1_at	BJ273221	-	-	6e-73	At3g06400	CHR11 (CHROMATIN-REMODELING PROTEIN 11)	C.G.	S.X.	Please select
0.44	3e-81	299	Vitis vinifera	1619897_at	CB918912	hypothetical protein LOC100244281	-	1e-72	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	C.G.	S.X.	Please select
0.22	1e-34	145	Zea mays	Zm.5942.2.A1_at	AW573352	-	-	9e-7	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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