Gene omics information

Query gene ID GmaAffx.93442.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.93442.1.S1_atCF808146--6e-12At1g76680OPR1S.X.H.G.
0.8091.5GmaAffx.6142.1.S1_atBU765938--3e-6At2g06050OPR3 (OPDA-REDUCTASE 3)S.X.H.G.
0.5979.5GmaAffx.77719.1.S1_atBI892705--6e-5At1g6658060S ribosomal protein L10 (RPL10C)S.X.H.G.
0.5778.8GmaAffx.88762.1.S1_x_atCK606334--1e-3At1g59700ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16)S.X.H.G.
0.5071.7GmaAffx.67686.2.S1_atBI472192--1e+1At5g22791-S.X.H.G.
0.3548.6GmaAffx.67686.1.S1_atBU927155--1e-3At5g642502-nitropropane dioxygenase family / NPD familyS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.399.9GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
39.799.9GSM29319779_C053.1O.R9O3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.499.9GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
30.899.9GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.799.8GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.699.8GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.599.8GSM29416932_3137.2H.R9H2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.499.8GSM29329477_C067.1P.R9P3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.499.8GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
21.699.8GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5901049GmaAffx.6142.1.S1_atBU765938--3e-6At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.331e-56220GmaAffx.83885.1.S1_atBG725901--2e-8At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.053e-550GmaAffx.93518.1.S1_atCF806869--2e-16At1g76690OPR2C.G.S.X.
0.052e-344GmaAffx.53501.1.S1_atBE331083--5e-6At1g76690OPR2C.G.S.X.
0.031e-138PsAffx.CL576Contig1_atPsAffx.CL576Contig1--2e-3At1g76680OPR1C.G.S.X.
0.025e-136PsAffx.C41000008_atPsAffx.C41000008--2e-1At4g27690VPS26B (VACUOLAR PROTEIN SORTING 26B)C.G.S.X.
0.035e-136GmaAffx.88371.1.S1_atBM521613--2e-8At5g23940EMB3009 (embryo defective 3009)C.G.S.X.
0.055e-136GmaAffx.63656.1.S1_atBM308732--3e-4At1g76690OPR2C.G.S.X.
0.012e+034PsAffx.C336000003_atPsAffx.C336000003--2e-1At5g22310unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.146e-1271Arabidopsis thalianaAt1g76680844001OPR1Encodes a a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.---C.G.S.X.
0.043e-342Hordeum vulgareContig5146_atContig5146--4e-21At1g76690OPR2C.G.S.X.
0.125e-1789Oryza sativaOs08g0459600AK071203.1-12-oxophytodienoate reductase 3 (EC 1.3.1.42)2e-7At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.364e-2099Populus trichocarpaPtp.640.2.S1_s_atBU894839hypothetical protein-1e-16At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.099e-548Triticum aestivumTa.8433.2.S1_a_atCA645972--1e-3At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.036e+030Vitis vinifera1622511_atCB975737--8e+0At5g03200zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e+032Zea maysZm.16967.1.A1_atCF972515--2e+0At1g12090ELP (EXTENSIN-LIKE PROTEIN)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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