Gene omics information

Query gene ID	GmaAffx.93392.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	GmaAffx.93392.1.S1_s_at	CF807760	-	-	2e-5	At5g42510	disease resistance-responsive family protein	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.48942.1.S1_at	BE023109	-	-	9e+0	Atcg00820	-	S.X.	H.G.	Please select
0.73	88.9	Gma.8425.1.S1_s_at	D83968.1	-	-	4e-3	At5g06900	CYP93D1	S.X.	H.G.	Please select
0.73	88.9	Gma.6727.1.S1_at	Y10493.1	-	-	9e-1	At3g26270	CYP71B25	S.X.	H.G.	Please select
0.59	79.5	Gma.8401.1.A1_at	BU547972	-	-	3e-1	At3g26170	CYP71B19	S.X.	H.G.	Please select
0.43	60.6	GmaAffx.92620.1.S1_s_at	CF806894	-	-	4e-6	At3g44250	CYP71B38	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.5	99.3	GSM293097	13_1105.1O.R066L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.2	99.3	GSM293077	77_1077.1N.R046L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM293553	67_3017.2A.R9A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.0	99.2	GSM292276	20_C079.1E.R9E2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.7	99.0	GSM293226	15_C065.1P.R9P2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6	98.9	GSM293527	43_2015.2A.R250L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.4	98.9	GSM293197	79_C053.1O.R9O3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1	98.8	GSM293241	29_1545.1P.R068L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8	98.7	GSM292386	60_1231.1F.R142U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8	98.7	GSM293589	20_2073.2B.R308L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.68	0	856	Gma.4332.1.S1_at	AI442841	-	-	1e-4	At5g42510	disease resistance-responsive family protein	C.G.	S.X.	Please select
0.03	1e-4	48	GmaAffx.8113.1.S1_at	BE659323	-	-	8e-2	At5g42500	disease resistance-responsive family protein	C.G.	S.X.	Please select
0.04	5e-4	46	GmaAffx.91558.1.S1_at	CF807283	-	-	9e-2	At3g13660	disease resistance response	C.G.	S.X.	Please select
0.04	5e-4	46	GmaAffx.91558.1.S1_s_at	CF807283	-	-	9e-2	At3g13660	disease resistance response	C.G.	S.X.	Please select
0.01	1e-1	38	PsAffx.C174000023_at	PsAffx.C174000023	-	-	2e-2	At1g53163	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	38	Gma.4330.1.S1_at	CD396375	-	-	2e-3	At1g22900	-	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C5000182_at	PsAffx.C5000182	-	-	9e-1	At1g63940	monodehydroascorbate reductase, putative	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C209000027_at	PsAffx.C209000027	-	-	8e-1	At2g40610	ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)	C.G.	S.X.	Please select
0.03	5e-1	36	Gma.5950.1.S1_s_at	BQ610563	-	-	4e-7	At3g13650	disease resistance response	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-5	50	Arabidopsis thaliana	At5g42510	834258	disease resistance-responsive family protein	F:molecular_function unknown;P:defense response;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	32	Hordeum vulgare	Contig18447_at	Contig18447	-	-	2e-1	At4g29670	thioredoxin family protein	C.G.	S.X.	Please select
0.03	5e-2	40	Oryza sativa	Os10g0398100	AK108922.1	-	Plant disease resistance response protein familyprotein	4e-1	At2g21100	disease resistance-responsive protein-related / dirigent protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.56222.1.A1_at	CV273280	hypothetical protein	-	2e-2	At5g12110	elongation factor 1B alpha-subunit 1 (eEF1Balpha1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-2	40	Triticum aestivum	TaAffx.8569.1.S1_at	CA623329	-	-	8e-1	At1g22900	-	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1618554_at	CF208496	hypothetical protein LOC100254355	-	2e-1	At5g62610	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.03	6e-1	34	Zea mays	Zm.3230.1.A1_at	BM335873	-	-	5e-3	At5g42510	disease resistance-responsive family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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