Gene omics information

Query gene ID	GmaAffx.93385.1.S1_x_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.93385.1.S1_x_at	CF806095	-	-	1e-68	At3g46060	ATRAB8A	S.X.	H.G.	Please select
0.23	29.9	GmaAffx.45372.1.S1_at	AI737036	-	-	2e-43	At2g47960	unknown protein	S.X.	H.G.	Please select
0.23	29.9	GmaAffx.58743.1.S1_at	BI321215	-	-	1e-12	At5g50530	CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein	S.X.	H.G.	Please select
0.11	14.2	GmaAffx.85162.1.S1_at	BI315839	MYB transcription factor MYB133	-	6e-22	At1g01520	myb family transcription factor	S.X.	H.G.	Please select
0.07	10.2	GmaAffx.82131.1.S1_at	BQ473196	-	-	2e-2	At4g14860	atofp11 (Arabidopsis thaliana ovate family protein 11)	S.X.	H.G.	Please select
0.06	9.0	Gma.6196.2.S1_a_at	BI972744	-	-	2e-35	At2g14120	dynamin-like protein 2b (ADL2b)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.8	99.7	GSM294236	85_3128.2H.SLH1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.0	99.7	GSM293403	86_1592.1Q.R301P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
18.3	99.7	GSM209594	resistant_12hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
13.6	99.5	GSM293669	93_3021.2B.R9B1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.8	99.5	GSM293303	85_1159.1P.R099U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.9	99.4	GSM294034	84_2277.2F.R028U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.8	99.4	GSM293419	10_C108.1R.R9R3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM293373	59_1590.1Q.R242P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4	99.2	GSM293504	22_2048.2A.R306P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4	99.2	GSM293882	33_3082.2E.SLE2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	1184	GmaAffx.93385.1.S1_at	CF806095	-	-	1e-68	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.70	0	1041	Gma.11282.1.S1_at	AI443415	-	-	2e-62	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.57	0	698	Gma.14354.1.S1_x_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.57	0	698	Gma.14354.1.S1_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.70	0	650	GmaAffx.91170.1.S1_x_at	CF806895	-	-	5e-58	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.70	0	650	GmaAffx.91170.1.S1_s_at	CF806895	-	-	5e-58	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.57	8e-151	533	Gma.14354.2.S1_at	BI472159	-	-	3e-53	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.41	6e-90	331	Gma.5641.1.S1_at	AW349077	-	-	1e-82	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.41	2e-55	216	Gma.8627.2.S1_at	BE607986	-	-	2e-64	At3g46060	ATRAB8A	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.56	1e-68	260	Arabidopsis thaliana	At3g46060	823749	ATRAB8A	small GTP-binding protein (ara-3)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.44	1e-42	173	Hordeum vulgare	Contig3335_at	Contig3335	-	-	3e-67	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.52	6e-32	139	Oryza sativa	Os.12233.2.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.60	3e-141	502	Populus trichocarpa	Ptp.2072.2.S1_s_at	CA931719	hypothetical protein	-	6e-83	At3g46060	ATRAB8A	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.45	2e-43	176	Triticum aestivum	Ta.6968.2.S1_a_at	CA604796	-	-	2e-33	At5g03520	ATRAB8C	C.G.	S.X.	Please select
0.49	5e-124	442	Vitis vinifera	1619471_at	BQ794353	hypothetical protein LOC100243217	-	1e-112	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.46	2e-65	248	Zea mays	Zm.6039.1.A1_at	BG837895	-	-	9e-65	At5g03520	ATRAB8C	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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