CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.93301.2.S1_s_at

Gene name 2'-hydroxydihydrodaidzein reductase

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 71.7 GmaAffx.93301.2.S1_s_at CF808497 2'-hydroxydihydrodaidzein reductase - 1e-11 At4g05050 UBQ11 (UBIQUITIN 11) S.X. H.G.
0.80 91.5 GmaAffx.48942.1.S1_at BE023109 - - 9e+0 Atcg00820 - S.X. H.G.
0.57 78.8 Gma.8401.1.A1_at BU547972 - - 3e-1 At3g26170 CYP71B19 S.X. H.G.
0.57 78.8 Gma.6727.1.S1_at Y10493.1 - - 9e-1 At3g26270 CYP71B25 S.X. H.G.
0.53 74.2 GmaAffx.93133.1.S1_s_at CF806755 - - 4e-1 At2g12880 zinc knuckle (CCHC-type) family protein S.X. H.G.
0.53 74.2 GmaAffx.93392.1.S1_s_at CF807760 - - 2e-5 At5g42510 disease resistance-responsive family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.1 99.6 GSM293546 60_2021.2A.R275L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.5 99.4 GSM293294 77_C067.1P.R9P3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.4 99.3 GSM293740 73_2127.2C.R132L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.2 99.2 GSM293527 43_2015.2A.R250L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.1 99.2 GSM292196 58_C009.1A.R9A2U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.8 99.1 GSM292884 5_C215.1L.R9L3U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7 99.1 GSM293802 45_3067.2D.R9D3L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.6 99.1 GSM293268 53_C067.1P.R9P3U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4 99.1 GSM293925 72_2195.2E.R239L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4 99.1 GSM292160 13-1013.1A.R008L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.59 0 1275 Gma.2712.1.S1_at AJ003246.1 2'-hydroxydihydrodaidzein reductase - 7e-1 Atcg01000 - C.G. S.X.
0.53 0 963 Gma.15664.1.S1_at BM269655 - - 7e-1 At2g27790 nucleic acid binding / nucleotide binding C.G. S.X.
0.38 2e-57 224 GmaAffx.91297.1.S1_at CF807022 - - 3e-1 At5g41430 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.16 6e-57 222 Gma.10883.2.S1_s_at AW350627 - - 7e-71 At4g05320 UBQ10 (POLYUBIQUITIN 10) C.G. S.X.
0.12 2e-50 200 Gma.10883.1.S1_at CD399178 - - 2e-96 At1g65350 UBQ13 C.G. S.X.
0.11 6e-48 192 Gma.17451.1.S1_at AW350045 - - 7e-109 At4g05320 UBQ10 (POLYUBIQUITIN 10) C.G. S.X.
0.11 6e-48 192 Gma.17451.1.S1_x_at AW350045 - - 7e-109 At4g05320 UBQ10 (POLYUBIQUITIN 10) C.G. S.X.
0.14 4e-15 83 GmaAffx.62690.1.S1_at BE348072 - - 9e-1 At5g58490 cinnamoyl-CoA reductase family C.G. S.X.
0.06 6e-14 79 GmaAffx.93644.1.S1_x_at CF806647 Ubiquitin - 7e-139 At4g05320 UBQ10 (POLYUBIQUITIN 10) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 1e-11 71 Arabidopsis thaliana At4g05050 825847 UBQ11 (UBIQUITIN 11) polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. - - - C.G. S.X.
0.14 1e-12 73 Hordeum vulgare Contig1110_at Contig1110 - - 5e-102 At4g05050 UBQ11 (UBIQUITIN 11) C.G. S.X.
0.12 5e-9 63 Oryza sativa Os06g0673500 CR289356 - Ubiquitin domain containing protein 4e-32 At4g02890 UBQ14 C.G. S.X.
0.15 6e-14 79 Populus trichocarpa Ptp.2157.2.S1_at BP930564 - - 1e-71 At4g02890 UBQ14 C.G. S.X.
0.14 8e-25 115 Triticum aestivum TaAffx.97978.1.S1_at BQ801131 - - 4e-81 At4g05050 UBQ11 (UBIQUITIN 11) C.G. S.X.
0.15 8e-16 83 Vitis vinifera 1620334_at CF205130.1 - - 3e-81 At5g03240 UBQ3 (POLYUBIQUITIN 3) C.G. S.X.
0.06 1e-3 44 Zea mays Zm.12132.3.S1_a_at AI461523 hypothetical protein LOC100192680 - 4e-50 At5g03240 UBQ3 (POLYUBIQUITIN 3) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage