Gene omics information

Query gene ID GmaAffx.93176.1.S1_s_at
Gene name expansin
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5374.2GmaAffx.93176.1.S1_s_atCF808901expansin-2e-24At2g28950ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)S.X.H.G.
0.5071.7Gma.2590.8.S1_atBM093439--2e-47At5g48300ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1)S.X.H.G.
0.3650.8Gma.2119.3.S1_atBQ253050--2e-51At5g03650SBE2.2 (starch branching enzyme 2.2)S.X.H.G.
0.3548.6GmaAffx.17650.3.S1_atAW202246homogentisate phytyltransferase VTE2-2-2e-1At3g06040ribosomal protein L12 family proteinS.X.H.G.
0.2228.1GmaAffx.17213.1.S1_atBU546744--2e-36At2g28000CPN60A (CHAPERONIN-60ALPHA)S.X.H.G.
0.1923.7GmaAffx.91779.1.S1_s_atCF807504glutamate 1-semialdehyde aminotransferase-9e-48At5g63570GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
95.2100.0GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
53.899.9GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
41.699.9GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
41.299.9GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
39.099.9GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
31.399.9GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
29.299.8GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
23.699.8GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
23.299.8GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
21.399.8GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001136GmaAffx.93176.1.S1_atCF808901expansin-2e-24At2g28950ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)C.G.S.X.
0.580958Gma.7006.1.S1_atAF516880.1expansin-6e-26At3g55500ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)C.G.S.X.
0.273e-2099Gma.13110.2.S1_atBI785748--2e-14At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)C.G.S.X.
0.181e-1687GmaAffx.85557.1.S1_atBG237376--2e-29At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)C.G.S.X.
0.291e-1377GmaAffx.42013.1.S1_atBM886535--4e-12At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)C.G.S.X.
0.127e-1271GmaAffx.67477.3.S1_atBE802373--1e-9At3g29030EXPA5 (EXPANSIN A5)C.G.S.X.
0.104e-1065Gma.13133.1.S1_atAW317404--1e-23At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)C.G.S.X.
0.232e-963Gma.812.1.S1_atCD399742--2e-19At5g05290ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)C.G.S.X.
0.142e-963Gma.2014.1.S1_atAW348565expansin-3e-15At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.492e-24113Arabidopsis thalianaAt2g28950817444ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.---C.G.S.X.
0.311e-1479Hordeum vulgareContig3674_atContig3674--1e-14At2g37640EXP3C.G.S.X.
0.284e-1789Oryza sativaOs05g0477600U85246.1-Alpha-expansin OsEXPA42e-16At1g69530ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)C.G.S.X.
0.513e-63242Populus trichocarpaPtp.1806.1.S1_s_atCN523732hypothetical protein-7e-25At2g28950ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)C.G.S.X.
0.334e-31135Triticum aestivumTa.5046.1.S1_atAY543535.1expansin EXPA9-3e-24At2g37640EXP3C.G.S.X.
0.525e-108389Vitis vinifera1608191_atCD798831hypothetical protein LOC100245911-4e-20At2g39700ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)C.G.S.X.
0.419e-46182Zea maysZm.13728.2.S1_atAY106266.1--1e-14At3g55500ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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