CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.93103.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.93103.1.S1_s_at CF808828 - - 5e-3 At4g15236 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding S.X. H.G.
0.91 98.6 Gma.4927.1.S1_at BG510284 - - 7e-3 At4g15236 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding S.X. H.G.
0.67 86.1 GmaAffx.92184.1.S1_s_at CF807909 - - 3e-1 At2g16900 - S.X. H.G.
0.63 82.9 GmaAffx.90026.1.S1_s_at CF805751 - - 5e-18 At5g60600 HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) S.X. H.G.
0.61 81.8 Gma.11238.1.S1_at BQ454110 - - 3e-121 At5g60600 HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) S.X. H.G.
0.55 76.3 Gma.4927.2.S1_at BM521060 - - 2e-9 At4g15236 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.7 99.3 GSM293408 90_C079.1Q.R9Q2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM293577 9_3009.2A.R9A2L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM293226 15_C065.1P.R9P2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1 98.8 GSM244909 3_VP9.I3L2.CEL, Experimental replicate 2 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
7.0 98.8 GSM293802 45_3067.2D.R9D3L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.3 98.6 GSM292793 53_C197.1K.R9K3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.3 98.6 GSM293938 84_3083.2E.R9E2L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.2 98.6 GSM294169 32_3137.2H.R9H2L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.2 98.6 GSM294266 22_2417.2I.R236L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.2 98.6 GSM292730 75_C165.1J.R9J1L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.57 0 880 Gma.4927.1.S1_at BG510284 - - 7e-3 At4g15236 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.54 0 747 Gma.4927.2.S1_at BM521060 - - 2e-9 At4g15236 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.18 1e-10 67 GmaAffx.39593.1.S1_at BG041850 - - 9e-5 At4g15215 PDR13 C.G. S.X.
0.04 4e-1 36 GmaAffx.24133.1.S1_at BQ610645 - - 8e-4 At2g45500 ATP binding / nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.03 2e+0 34 GmaAffx.93400.1.S1_at CF809125 - - 1e-28 At1g13260 RAV1 C.G. S.X.
0.02 2e+0 34 GmaAffx.5531.1.S1_at BQ740711 - - 8e-3 At4g17245 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 2e+0 34 Gma.18015.1.S1_at BE659748 - - 6e-1 At1g54445 - C.G. S.X.
0.01 7e+0 32 PsAffx.C52000010_s_at PsAffx.C52000010 - - 1e+0 At2g46360 unknown protein C.G. S.X.
0.01 7e+0 32 PsAffx.C4000062_at PsAffx.C4000062 - - 4e-1 At3g11880 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-3 42 Arabidopsis thaliana At4g15236 827189 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:membrane;BOMAFPV - - - C.G. S.X.
0.04 1e+1 30 Hordeum vulgare HV05H24u_x_at HV05H24u - - 5e+0 At3g44784 unknown protein C.G. S.X.
0.03 3e+0 34 Oryza sativa Os08g0211300 9636.m01063 - - 4e+0 At5g48420 unknown protein C.G. S.X.
0.24 1e-29 131 Populus trichocarpa PtpAffx.215848.1.S1_at pmrna30265 hypothetical protein - 2e+0 At4g27230 HTA2 (histone H2A) C.G. S.X.
0.04 1e+0 34 Triticum aestivum Ta.11861.1.A1_at BQ170945 - - 9e+0 At2g10557 unknown protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1607162_s_at CF512517 - - 3e+0 At2g30570 PSBW (PHOTOSYSTEM II REACTION CENTER W) C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.901.1.A1_at AI770894 - - 1e+1 At5g47455 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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