CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.93101.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 93.0 GmaAffx.93101.1.S1_at CF808826 - - 1e+0 At5g23760 heavy-metal-associated domain-containing protein S.X. H.G.
0.92 98.9 GmaAffx.63754.1.A1_at BG725568 - - 1e+1 At5g64240 AtMC3 (metacaspase 3) S.X. H.G.
0.92 98.9 GmaAffx.93101.1.S1_s_at CF808826 - - 1e+0 At5g23760 heavy-metal-associated domain-containing protein S.X. H.G.
0.92 98.9 GmaAffx.55759.1.S1_at BM954946 - - 1e-2 At5g03130 unknown protein S.X. H.G.
0.83 92.5 GmaAffx.20966.1.S1_at AW306499 - - 3e-6 Atcg00130 - S.X. H.G.
0.42 59.3 Gma.1951.2.S1_at CA783485 - - 3e+0 At4g11600 ATGPX6 (GLUTATHIONE PEROXIDASE 6) S.X. H.G.
0.38 53.3 GmaAffx.62364.1.S1_at AW733764 - - 6e-18 At5g36210 serine-type peptidase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
76.0 100.0 GSM294702 66_3227.2M.SLM2U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
69.1 100.0 GSM294509 72_3189.2K.SLK2U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
42.6 99.9 GSM294355 17_3175.2J.SLJ3U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
40.5 99.9 GSM293021 26_C021.1N.SLN1U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
40.4 99.9 GSM293300 82_C059.1P.SLP1U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
35.2 99.9 GSM294257 17_3149.2I.SLI1U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
33.8 99.9 GSM294669 40_3227.2M.SLM2L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.9 99.9 GSM293888 39_3081.2E.SLE2U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.5 99.9 GSM293878 2_3077.2E.SLE1U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.5 99.9 GSM293850 89_3061.2D.SLD2U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1362 GmaAffx.93101.1.S1_s_at CF808826 - - 1e+0 At5g23760 heavy-metal-associated domain-containing protein C.G. S.X.
0.79 0 1059 GmaAffx.63737.1.S1_at BG653088 - - 1e+0 At5g23760 heavy-metal-associated domain-containing protein C.G. S.X.
0.03 1e-1 38 GmaAffx.9045.1.S1_at BQ611021 - - 9e-1 At4g23430 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.04 5e-1 36 Gma.1.1.A1_at U36442.1 lipoxygenase - 5e-1 At5g20180 ribosomal protein L36 family protein C.G. S.X.
0.04 5e-1 36 Gma.1.1.S1_at U36442.1 lipoxygenase /// lipoxygenase-10 - 5e-1 At5g20180 ribosomal protein L36 family protein C.G. S.X.
0.01 2e+0 34 PsAffx.C379000002_at PsAffx.C379000002 - - 1e+1 At5g50175 unknown protein C.G. S.X.
0.02 2e+0 34 PsAffx.C254000006_s_at PsAffx.C254000006 - - 1e+1 At4g33960 unknown protein C.G. S.X.
0.01 2e+0 34 PsAffx.C213000001_at PsAffx.C213000001 - - 7e+0 At3g10350 anion-transporting ATPase family protein C.G. S.X.
0.01 2e+0 34 HgAffx.83.1.S1_at AF283665.1 - - 1e-1 At2g31360 ADS2 (16:0Delta9 Arabidopsis desaturase 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At5g23760 832441 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMPFABV - - - C.G. S.X.
0.03 3e+0 32 Hordeum vulgare HD04G09u_at HD04G09u - - 1e+0 At2g46690 auxin-responsive family protein C.G. S.X.
0.03 7e-1 36 Oryza sativa OsAffx.9324.1.S1_at - - - 0 C.G. S.X.
0.05 3e-2 40 Populus trichocarpa PtpAffx.215468.1.S1_at pmrna29683 cytochrome P450 /// cytochrome P450 /// hypothetical protein - 2e-1 At5g25130 CYP71B12 C.G. S.X.
0.04 1e+0 34 Triticum aestivum Ta.1909.1.A1_at BE446796 - - 5e-2 At3g55390 integral membrane family protein C.G. S.X.
0.04 2e+0 32 Vitis vinifera 1621429_at CB971575 - - 1e+0 At5g60560 F-box family protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.5117.1.A1_at AI600920 hypothetical protein LOC100276666 - 2e+0 At4g36420 ribosomal protein L12 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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