CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.93071.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 79.5 GmaAffx.93071.1.S1_s_at CF808796 - - 2e-52 At5g13420 transaldolase, putative S.X. H.G.
0.50 71.7 Gma.16750.2.S1_s_at BI700016 - - 3e-10 At5g40760 G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6) S.X. H.G.
0.50 71.7 GmaAffx.92014.1.S1_s_at CF807739 - - 1e-81 At2g18230 AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2) S.X. H.G.
0.44 63.3 Gma.2162.1.S1_at BI968990 - - 1e-64 At2g01140 fructose-bisphosphate aldolase, putative S.X. H.G.
0.40 57.1 PsAffx.psHA005iH10r_s_at PsAffx.psHA005iH10r - - 4e-34 At2g36460 fructose-bisphosphate aldolase, putative S.X. H.G.
0.20 25.1 GmaAffx.90559.1.S1_s_at CF806284 - - 2e-23 At3g48890 ATMP2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.5 96.6 GSM244798 15_CON.I3U1.CEL, Experimental replicate 1 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.5 96.6 GSM244916 4_SLO.I3U1.CEL, Experimental replicate 1 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.2 96.0 GSM293670 9_3035.2B.SLB3U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2 96.0 GSM293595 26_2077.2B.R246U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1 95.8 GSM293558 71_3013.2A.SLA3U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9 95.4 GSM293416 98_1565.1Q.R153U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9 95.4 GSM293250 37_C061.1P.SLP2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM244854 28_SLO.I3U4.CEL, Experimental replicate 4 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.7 94.8 GSM293745 78_3049.2C.SLC3L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7 94.8 GSM293313 94_1237.1P.R145U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-2 40 GmaAffx.85545.1.S1_at BQ453101 - - 2e-4 At5g13420 transaldolase, putative C.G. S.X.
0.01 5e-1 36 PsAffx.C121000037_at PsAffx.C121000037 - - 5e-1 At2g44740 CYCP4 C.G. S.X.
0.01 2e+0 34 PsAffx.C325000004_at PsAffx.C325000004 - - 2e-1 At3g25890 AP2 domain-containing transcription factor, putative C.G. S.X.
0.01 2e+0 34 PsAffx.C132000002_at PsAffx.C132000002 - - 4e+0 At3g53970 proteasome inhibitor-related C.G. S.X.
0.03 2e+0 34 HgAffx.6675.1.S1_at CB825536 - - 5e+0 At5g44200 CBP20 (CAP-BINDING PROTEIN 20) C.G. S.X.
0.03 2e+0 34 GmaAffx.88811.1.A1_at CK605910 - - 1e+1 At5g13330 Rap2.6L (related to AP2 6L) C.G. S.X.
0.03 2e+0 34 GmaAffx.88811.1.S1_at CK605910 - - 1e+1 At5g13330 Rap2.6L (related to AP2 6L) C.G. S.X.
0.02 2e+0 34 Gma.4606.1.S1_at BF426114 - - 9e-12 At5g13510 ribosomal protein L10 family protein C.G. S.X.
0.03 8e+0 32 PsAffx.psHA003iH05r_at PsAffx.psHA003iH05r - - 9e-1 At4g19000 IWS1 C-terminus family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.30 2e-52 206 Arabidopsis thaliana At5g13420 831183 transaldolase, putative F:catalytic activity, transaldolase activity;P:response to cadmium ion;C:mitochondrion, chloroplast stroma, chloroplast;BOPMAF - - - C.G. S.X.
0.03 3e+0 32 Hordeum vulgare Contig21914_at Contig21914 - - 5e-2 At1g64130 unknown protein C.G. S.X.
0.19 1e-5 52 Oryza sativa Os01g0926300 AK067632.1 - Transaldolase (EC 2.2.1.2) 3e-25 At5g13420 transaldolase, putative C.G. S.X.
0.49 1e-57 224 Populus trichocarpa PtpAffx.10604.6.A1_at CV234387 hypothetical protein - 4e-50 At5g13420 transaldolase, putative C.G. S.X.
0.03 1e-1 38 Triticum aestivum Ta.9372.1.S1_at BJ286526 - - 5e-15 At5g13420 transaldolase, putative C.G. S.X.
0.47 3e-119 426 Vitis vinifera 1614221_at CB981483 hypothetical protein LOC100247241 - 7e-75 At5g13420 transaldolase, putative C.G. S.X.
0.14 1e-8 59 Zea mays Zm.2199.4.A1_at BG837924 - - 6e-17 At5g13420 transaldolase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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