Gene omics information

Query gene ID GmaAffx.93046.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.3GmaAffx.93046.1.S1_atCF808771--3e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)S.X.H.G.
0.7790.3GmaAffx.36250.1.S1_s_atBG551078--2e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)S.X.H.G.
0.4463.3GmaAffx.78968.2.S1_atBM188587--9e-13At5g39670calcium-binding EF hand family proteinS.X.H.G.
0.4057.1GmaAffx.59154.1.S1_atBG508624--7e+0At4g37685unknown proteinS.X.H.G.
0.3650.8GmaAffx.87526.1.S1_atBM954581--6e+0At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)S.X.H.G.
0.2939.0Gma.3639.1.S1_atAB083030.1syringolide-induced protein B15-3-5-1e-4At2g38600acid phosphatase class B family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.499.6GSM29223845_1051.1B.R029L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.999.6GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.399.1GSM29380245_3067.2D.R9D3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.299.0GSM29247371_C111.1G.R9G1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.799.0GSM29363865_2059.2B.R199U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.698.9GSM29248784_1251.1G.R158L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.498.9GSM29239570_1221.1F.R136U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.498.9GSM29242023_1251.1G.R158U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.398.9GSM2939631_2273.2F.R139U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.298.9GSM2449093_VP9.I3L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.850835GmaAffx.36250.1.S1_s_atBG551078--2e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)C.G.S.X.
0.042e+034HgAffx.21008.1.S1_atBI748745--3e+0At5g18407-C.G.S.X.
0.022e+034Gma.16337.2.S1_atBI424148--5e-4At3g15180proteasome-relatedC.G.S.X.
0.016e+032PsAffx.C97000051_atPsAffx.C97000051--3e-1At4g25930unknown proteinC.G.S.X.
0.016e+032PsAffx.C47000073_atPsAffx.C47000073--4e+0At1g20140ASK4 (ARABIDOPSIS SKP1-LIKE 4)C.G.S.X.
0.036e+032PsAffx.C34000081_atPsAffx.C34000081--3e+0At5g55507hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.006e+032PsAffx.C258000003_atPsAffx.C258000003--8e-2At4g12740adenine-DNA glycosylase-related / MYH-relatedC.G.S.X.
0.016e+032PsAffx.C25000105_s_atPsAffx.C25000105--1e-1At5g66080protein phosphatase 2C family protein / PP2C family proteinC.G.S.X.
0.016e+032PsAffx.C23000015_atPsAffx.C23000015--8e-2At2g38490CIPK22 (CBL-INTERACTING PROTEIN KINASE 22)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt5g62520836372SRO5 (SIMILAR TO RCD ONE 5)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.---C.G.S.X.
0.032e+032Hordeum vulgareHU08A18u_atHU08A18u--4e+0At5g46560unknown proteinC.G.S.X.
0.039e+032Oryza sativaOsAffx.29130.1.S1_at---0C.G.S.X.
0.093e-550Populus trichocarpaPtpAffx.210421.1.S1_atpmrna20471hypothetical protein-4e-33At1g73805calmodulin bindingC.G.S.X.
0.041e+034Triticum aestivumTa.28125.2.S1_atCA629648--1e+0At3g27660OLEO4 (OLEOSIN 4)C.G.S.X.
0.035e+030Vitis vinifera1620801_atCF212147hypothetical protein LOC100245496-1e+0At4g09153LCR36 (Low-molecular-weight cysteine-rich 36)C.G.S.X.
0.037e+030Zea maysZm.860.1.A1_atAI600859--1e+0At1g32980subtilisin-like serine protease-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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