Gene omics information

Query gene ID GmaAffx.92861.1.S1_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5071.7GmaAffx.92861.1.S1_s_atCF808586--8e-2At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)S.X.H.G.
0.6382.9GmaAffx.24666.1.S1_atCA783210--2e-1At2g39705RTFL8 (ROTUNDIFOLIA LIKE 8)S.X.H.G.
0.4665.5Gma.11341.3.S1_s_atBM177332--8e-26At4g17900zinc-binding family proteinS.X.H.G.
0.4259.3PsAffx.psHA006iH10r_s_atPsAffx.psHA006iH10r--1e+0At2g28140unknown proteinS.X.H.G.
0.3346.1GmaAffx.58176.1.S1_atBU577254--3e-1At2g39540gibberellin-regulated family proteinS.X.H.G.
0.3243.7GmaAffx.65140.1.S1_atBI700031--7e-2At4g33670L-galactose dehydrogenase (L-GalDH)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.797.8GSM29259626_C146.1I.V7I1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.197.3GSM29395613_2286.2F.R031P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM2926537_C156.1I.V7I2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM29360838_2088.2B.R293P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM29222216_C029.1B.R9B2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM29383575_2148.2D.R010P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM29410965_2324.2G.R214P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM29258919_C160.1I.V7I3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.897.0GSM2938569_3060.2D.V7D1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.696.7GSM29371853_2144.2C.R109P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.940850GmaAffx.92861.1.S1_atCF808586--8e-2At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)C.G.S.X.
0.940850GmaAffx.92861.1.S1_x_atCF808586--8e-2At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)C.G.S.X.
0.413e-101369GmaAffx.33081.1.S1_s_atBQ453706--3e+0At1g28306-C.G.S.X.
0.112e-654Gma.11929.1.S1_atAI437723HMG-1 like protein gene-2e-13At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)C.G.S.X.
0.112e-654Gma.11929.1.S1_x_atAI437723HMG-1 like protein gene-2e-13At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)C.G.S.X.
0.027e-342PsAffx.C91000052_atPsAffx.C91000052--7e-1At2g42870PAR1 (PHY RAPIDLY REGULATED 1)C.G.S.X.
0.147e-342GmaAffx.92359.1.S1_s_atCF808084HMG-1 like protein gene-5e-6At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)C.G.S.X.
0.033e-240PsAffx.CL547Contig1_atPsAffx.CL547Contig1--6e+0At3g60540sec61beta family proteinC.G.S.X.
0.023e-240PsAffx.C118000035_s_atPsAffx.C118000035--2e+1At5g53290CRF3 (CYTOKININ RESPONSE FACTOR 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.188e-238Arabidopsis thalianaAt1g20693838658HMGB2 (HIGH MOBILITY GROUP B 2)Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.---C.G.S.X.
0.042e-136Hordeum vulgareEBro08_SQ002_H13_atEBro08_SQ002_H13--6e-1At3g43432unknown proteinC.G.S.X.
0.074e-240Oryza sativaOs09g0551600D29711.1-HMGd1 protein (Nucleasome/chromatin assemblyfactor D protein NFD101)1e-1Atmg00840-C.G.S.X.
0.239e-24111Populus trichocarpaPtpAffx.13687.1.S1_atDN492122high mobility group family-4e-8At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
0.043e-136Triticum aestivumTaAffx.56445.1.S1_x_atCA651526--4e-1At3g20600NDR1 (non race-specific disease resistance 1)C.G.S.X.
0.356e-40163Vitis vinifera1612752_atCF201925.1--3e-20At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
0.072e+032Zea maysZm.6732.1.S1_s_atAF440221.1HMG-like nucleosome/chromatin assembly factor D-3e-11At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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