Gene omics information

Query gene ID	GmaAffx.92802.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.92802.1.S1_s_at	CF806550	-	-	8e-33	At1g75440	UBC16 (ubiquitin-conjugating enzyme 16)	S.X.	H.G.	Please select
0.80	91.5	Gma.6207.1.S1_s_at	CF922738	-	-	7e-16	At4g19640	ARA7	S.X.	H.G.	Please select
0.57	78.8	Gma.17436.1.S1_at	CD397773	-	-	4e-23	At4g36450	ATMPK14 (Mitogen-activated protein kinase 14)	S.X.	H.G.	Please select
0.55	76.3	GmaAffx.8999.1.S1_at	CD403960	-	-	1e-32	At5g25760	PEX4 (PEROXIN4)	S.X.	H.G.	Please select
0.29	39.0	GmaAffx.90193.1.S1_s_at	CF805918	-	-	8e-21	At4g31170	protein kinase family protein	S.X.	H.G.	Please select
0.26	33.9	Gma.15387.1.S1_s_at	CD399274	-	-	8e-55	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.1	92.3	GSM293524	40_2027.2A.R196L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.0	91.7	GSM294036	86_2257.2F.R277L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.0	91.7	GSM293377	62_1573.1Q.R160L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.0	91.7	GSM293525	41_2019.2A.R192L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.0	91.7	GSM293494	13_2013.2A.R203L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.0	91.7	GSM293237	25_1543.1P.R053L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
1.9	90.9	GSM293129	42_1127.1O.R081L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
1.9	90.9	GSM294041	90_2279.2F.R015L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
1.9	90.9	GSM293366	52_1559.1Q.R134L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
1.9	90.9	GSM293233	21_1544.1P.R053P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	3e-2	40	PsAffx.C7000179_at	PsAffx.C7000179	-	-	5e+0	At5g03660	unknown protein	C.G.	S.X.	Please select
0.04	5e-1	36	HgAffx.12860.1.S1_at	CB375122	-	-	1e+0	At3g45280	SYP72 (SYNTAXIN OF PLANTS 72)	C.G.	S.X.	Please select
0.03	5e-1	36	GmaAffx.93045.1.S1_at	CF808770	-	-	6e-18	At5g44390	FAD-binding domain-containing protein	C.G.	S.X.	Please select
0.03	5e-1	36	GmaAffx.74213.1.S1_at	CD413066	-	-	5e-2	At4g17020	transcription factor-related	C.G.	S.X.	Please select
0.02	5e-1	36	GmaAffx.40455.1.S1_at	BG043272	-	-	2e-9	At1g54870	binding / catalytic/ oxidoreductase	C.G.	S.X.	Please select
0.01	5e-1	36	Gma.6070.1.S1_at	BQ611319	-	-	3e-1	At1g73160	glycosyl transferase family 1 protein	C.G.	S.X.	Please select
0.04	2e+0	34	HgAffx.14748.1.S1_at	CB299392	-	-	2e+0	At1g68500	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	34	GmaAffx.85545.1.S1_at	BQ453101	-	-	2e-4	At5g13420	transaldolase, putative	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.58029.1.S1_at	BE059765	-	-	4e+0	At5g51860	MADS-box protein (AGL72)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.61	8e-33	141	Arabidopsis thaliana	At1g75440	843880	UBC16 (ubiquitin-conjugating enzyme 16)	F:ubiquitin-protein ligase activity, small conjugating protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;MFOPVB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.38	8e-13	73	Hordeum vulgare	Contig4967_s_at	Contig4967	-	-	5e-13	At1g75440	UBC16 (ubiquitin-conjugating enzyme 16)	C.G.	S.X.	Please select
0.39	2e-28	127	Oryza sativa	Os12g0636800	AK071648.1	-	Ubiquitin-conjugating enzyme 18 (Fragment)	5e-13	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	2e-37	157	Populus trichocarpa	PtpAffx.8171.2.A1_a_at	CV257321	hypothetical protein	-	2e-24	At1g75440	UBC16 (ubiquitin-conjugating enzyme 16)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.36	5e-19	95	Triticum aestivum	Ta.26820.1.A1_at	CD491334	-	-	2e-30	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	C.G.	S.X.	Please select
0.45	5e-59	226	Vitis vinifera	1616979_s_at	CD711896	hypothetical protein LOC100262599	-	1e-63	At1g75440	UBC16 (ubiquitin-conjugating enzyme 16)	C.G.	S.X.	Please select
0.27	9e-31	133	Zea mays	Zm.8033.1.S1_at	CO522473	ubiquitin-conjugating enzyme E2 W	-	1e-26	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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