Gene omics information

Query gene ID	GmaAffx.92523.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	63.3	GmaAffx.92523.1.S1_at	CF808248	-	-	7e-8	At4g26710	ATP synthase subunit H family protein	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.88908.1.S1_at	CK605775	-	-	2e-28	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	S.X.	H.G.	Please select
0.38	53.3	GmaAffx.93028.1.S1_at	CF808753	-	-	7e-36	At3g52990	pyruvate kinase, putative	S.X.	H.G.	Please select
0.36	50.8	GmaAffx.91277.1.A1_x_at	CF807002	-	-	3e-104	At1g23490	ATARF1 (ADP-RIBOSYLATION FACTOR 1)	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.93148.1.S1_at	CF808873	-	-	2e-26	At3g56190	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)	S.X.	H.G.	Please select
0.05	8.0	GmaAffx.89191.1.S1_x_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.3	99.8	GSM293113	28_C047.1O.R9O2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.9	99.6	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
13.6	99.5	GSM293112	27_C047.1O.R9O2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.5	99.2	GSM147953	Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
9.3	99.2	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4	99.1	GSM147939	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
8.3	99.1	GSM293116	30_1107.1O.R067U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.3	99.1	GSM292183	43-C017.1A.R9A3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.9	99.0	GSM293114	29_1139.1O.R087L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.8	99.0	GSM292170	26-C003.1A.R9A1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.82	0	765	Gma.7079.1.S1_s_at	BU577711	-	-	2e-5	At4g26710	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.49	5e-167	587	Gma.7079.2.S1_at	BG044106	-	-	6e+0	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.34	2e-101	369	GmaAffx.51757.1.S1_at	AW164723	-	-	3e-1	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.29	1e-44	180	Gma.13032.1.S1_at	BQ629879	-	-	1e-3	At4g26710	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.02	4e-1	36	PsAffx.C171000041_at	PsAffx.C171000041	-	-	3e+0	At1g70870	major latex protein-related / MLP-related	C.G.	S.X.	Please select
0.03	4e-1	36	GmaAffx.55247.1.S1_at	BU548173	-	-	3e-5	At4g13460	SUVH9	C.G.	S.X.	Please select
0.03	4e-1	36	Gma.6766.1.S1_at	CD400112	-	-	9e-18	At2g04280	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	34	PsAffx.C178000033_at	PsAffx.C178000033	-	-	4e-2	At2g21210	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.03	2e+0	34	HgAffx.15091.1.S1_at	CB375466	-	-	4e+0	At5g19800	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	7e-8	57	Arabidopsis thaliana	At4g26710	828778	ATP synthase subunit H family protein	F:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	8e-3	40	Hordeum vulgare	Contig6470_at	Contig6470	-	-	1e-3	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.14	6e-4	46	Oryza sativa	Os04g0660600	AK120899.1	-	ATP synthase subunit H family protein	3e-10	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.24	3e-14	79	Populus trichocarpa	Ptp.6175.2.S1_at	CV246158	hypothetical protein	-	3e-17	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	4e+0	32	Triticum aestivum	Ta.28311.2.S1_x_at	CA630222	Plasma membrane H+-ATPase subunit H	-	6e-5	At4g26710	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.20	1e-25	115	Vitis vinifera	1612654_at	CA809225	hypothetical protein LOC100256926	-	3e-19	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.03	5e-1	34	Zea mays	Zm.16757.1.A1_at	BM380106	-	-	3e-2	At3g03660	WOX11 (WUSCHEL related homeobox 11)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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