CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.92473.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.92473.1.S1_s_at CF809138 - - 1e+0 At3g01360 unknown protein S.X. H.G.
0.60 80.7 GmaAffx.22482.1.S1_at AW185059 - - 1e-28 At3g46460 UBC13 (ubiquitin-conjugating enzyme 13) S.X. H.G.
0.53 74.2 Gma.10261.1.S1_at BG839311 - - 2e-52 At3g27090 - S.X. H.G.
0.53 74.2 GmaAffx.22482.1.S1_x_at AW185059 - - 1e-28 At3g46460 UBC13 (ubiquitin-conjugating enzyme 13) S.X. H.G.
0.33 46.1 Gma.3735.3.S1_s_at BU764012 - - 1e-67 At1g14400 UBC1 (UBIQUITIN CARRIER PROTEIN 1) S.X. H.G.
0.20 25.1 GmaAffx.34491.1.S1_at BE820865 - - 9e-13 At1g16360 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.0 97.2 GSM309343 transgenic RNAiOleosin, biol rep 1, tech rep 1 GSE12300 Suppression of oleosin in soybean cotyledon
3.5 96.6 GSM294514 77_2502.2K.R025P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4 96.4 GSM292877 53_C212.1L.SLL3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4 96.4 GSM292839 19_C199.1L.V7L1U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4 96.4 GSM293534 4_3006.2A.R9A1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3 96.2 GSM293501 1_2044.2A.R007P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3 96.2 GSM292890 65_C202.1L.R9L1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3 96.2 GSM294114 6_3114.2G.SLG1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2 96.0 GSM309344 transgenic RNAiOleosin, biol rep 1, tech rep 2 GSE12300 Suppression of oleosin in soybean cotyledon
3.2 96.0 GSM292875 51_C200.1L.V7L1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1191 GmaAffx.92473.1.A1_at CF808198 - - 1e+0 At3g01360 unknown protein C.G. S.X.
1.00 0 1191 GmaAffx.92473.1.S1_at CF809138 - - 1e+0 At3g01360 unknown protein C.G. S.X.
0.83 0 747 Gma.5946.1.S1_at BF219527 - - 1e+0 At3g55140 pectate lyase family protein C.G. S.X.
0.01 5e-1 36 PsAffx.C60000005_at PsAffx.C60000005 - - 2e+0 At2g28440 proline-rich family protein C.G. S.X.
0.02 5e-1 36 GmaAffx.88213.1.S1_at AI965815 - - 2e+0 At3g45490 - C.G. S.X.
0.03 5e-1 36 GmaAffx.33306.1.S1_at BM521167 - - 6e-2 At1g44608 unknown protein C.G. S.X.
0.02 2e+0 34 PsAffx.C8000126_at PsAffx.C8000126 - - 9e+0 At4g23780 unknown protein C.G. S.X.
0.03 2e+0 34 GmaAffx.67480.1.S1_at BU084291 - - 4e+0 At3g61280 - C.G. S.X.
0.04 2e+0 34 GmaAffx.41902.1.S1_at BM525811 - - 9e-1 At3g11640 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 34 Arabidopsis thaliana At3g01360 821158 unknown protein F:molecular_function unknown;P:unknown;C:unknown;PO - - - C.G. S.X.
0.05 2e-1 36 Hordeum vulgare Contig10136_s_at Contig10136 - - 7e-2 At5g01350 unknown protein C.G. S.X.
0.03 1e+1 32 Oryza sativa Os01g0348900 AF435970.1 - Jacalin-related lectin domain containing protein 2e+0 At1g01080 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative C.G. S.X.
0.12 9e-15 81 Populus trichocarpa PtpAffx.16450.1.S1_a_at CV244313 hypothetical protein - 4e-1 At1g48240 ATNPSN12 C.G. S.X.
0.05 4e-1 36 Triticum aestivum Ta.16364.1.S1_at CA605197 - - 7e-2 At5g01350 unknown protein C.G. S.X.
0.07 3e-11 67 Vitis vinifera 1606989_at CA818541 similar to putative protein - 3e-4 At5g01350 unknown protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.17687.1.S1_at CK370166 - - 2e-1 At1g30972 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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