Gene omics information

Query gene ID	GmaAffx.92278.1.S1_s_at
Gene name	6-phosphogluconate dehydrogenase
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.41	58.1	GmaAffx.92278.1.S1_s_at	CF808003	6-phosphogluconate dehydrogenase	-	4e-74	At3g02360	6-phosphogluconate dehydrogenase family protein	S.X.	H.G.	Please select
0.88	93.4	Gma.15492.1.S1_s_at	AF276302.1	chalcone isomerase	-	2e+0	At1g52510	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.86	93.0	Gma.4300.1.S1_s_at	S46989.1	chalcone synthase	-	5e-29	At5g13930	TT4 (TRANSPARENT TESTA 4)	S.X.	H.G.	Please select
0.86	93.0	Gma.4300.3.S1_s_at	AI443042	chalcone synthase	-	1e-5	At5g13930	TT4 (TRANSPARENT TESTA 4)	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.37677.1.S1_s_at	BE022626	HIDH mRNA for 2-hydroxyisoflavanone dehydratase	-	3e-1	At2g30050	transducin family protein / WD-40 repeat family protein	S.X.	H.G.	Please select
0.78	90.6	Gma.4300.3.S1_x_at	AI443042	chalcone synthase	-	1e-5	At5g13930	TT4 (TRANSPARENT TESTA 4)	S.X.	H.G.	Please select
0.67	86.1	GmaAffx.92722.1.S1_at	CF807561	2-hydroxyisoflavanone dehydratase	-	6e-1	At2g30050	transducin family protein / WD-40 repeat family protein	S.X.	H.G.	Please select
0.63	82.9	GmaAffx.91944.1.S1_s_at	CF808330	NAD(P)H dependent 6'-deoxychalcone synthase	-	4e-2	At4g37690	galactosyl transferase GMA12/MNN10 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.4	98.9	GSM244928	7_V71.I2W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
7.0	98.8	GSM244916	4_SLO.I3U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.3	98.6	GSM244910	40_SLO.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.1	98.5	GSM244865	2_V71.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.0	98.5	GSM244806	17_CON.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.7	98.4	GSM244891	36_SLO.I3L1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.6	98.3	GSM244909	3_VP9.I3L2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.6	98.3	GSM244934	9_SLO.I2W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.4	98.2	GSM293543	58_2017.2A.R245L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM293248	35_1155.1P.R097L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	0	983	Gma.1689.1.S1_s_at	AB007907.1	6-phosphogluconate dehydrogenase	-	1e-114	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.39	5e-68	258	GmaAffx.65732.1.S1_at	BG239631	-	-	3e-29	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.15	1e-25	117	Gma.3145.1.S1_at	BQ610556	-	-	2e-38	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.15	4e-1	36	GmaAffx.76498.1.S1_s_at	AI736837	-	-	4e-9	At5g41670	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.07	4e-1	36	GmaAffx.76498.1.A1_s_at	AI736837	-	-	4e-9	At5g41670	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.04	4e-1	36	Gma.3609.2.S1_at	BF068658	-	-	5e+0	At5g62998	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	34	PsAffx.psHB012xO17f_at	PsAffx.psHB012xO17f	-	-	9e-1	At4g04110	Toll-Interleukin-Resistance (TIR) domain-containing protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C6000105_at	PsAffx.C6000105	-	-	5e+0	At5g58990	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	PsAffx.C20000098_at	PsAffx.C20000098	-	-	1e+0	At5g05960	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	4e-74	278	Arabidopsis thaliana	At3g02360	821163	6-phosphogluconate dehydrogenase family protein	F:in 6 functions;P:response to salt stress;C:peroxisome;BOMPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	34	Hordeum vulgare	Contig15476_at	Contig15476	-	-	2e+0	At1g48325	Expressed protein	C.G.	S.X.	Please select
0.19	2e-13	77	Oryza sativa	Os06g0111500	AF486280.2	-	Cytosolic 6-phosphogluconate dehydrogenase	1e-58	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.52	2e-46	186	Populus trichocarpa	Ptp.4679.1.A1_s_at	AI162532	hypothetical protein	-	2e-33	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	3e-7	56	Triticum aestivum	Ta.1683.1.S1_x_at	CD871690	-	-	1e-27	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.32	6e-86	315	Vitis vinifera	1616473_at	CF414627	hypothetical protein LOC100246134	-	5e-135	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.12	2e-3	42	Zea mays	Zm.406.2.A1_a_at	CK348246	NADPH producing dehydrogenase of the oxidative pentose phosphate pathway	-	1e-12	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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