CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.92182.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 93.0 GmaAffx.92182.1.S1_s_at CF807907 - - 9e-1 At1g69800 CBS domain-containing protein S.X. H.G.
0.67 86.1 Gma.7528.2.S1_at BM891312 - - 3e-49 At4g16143 IMPA-2 (IMPORTIN ALPHA ISOFORM 2) S.X. H.G.
0.61 81.8 GmaAffx.91113.1.S1_s_at CF806834 - - 1e-31 At4g23460 beta-adaptin, putative S.X. H.G.
0.55 76.3 GmaAffx.29121.1.S1_at BU762958 - - 1e+0 At4g17310 unknown protein S.X. H.G.
0.47 66.6 Gma.5720.2.S1_a_at BG652626 - - 2e-5 At1g51200 zinc finger (AN1-like) family protein S.X. H.G.
0.44 63.3 GmaAffx.90621.1.S1_s_at CF806346 - - 4e-50 At2g21270 ubiquitin fusion degradation UFD1 family protein S.X. H.G.
0.43 60.6 GmaAffx.92886.1.S1_s_at CF808611 - - 3e-41 At5g09900 EMB2107 (EMBRYO DEFECTIVE 2107) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.7 94.8 GSM308556 Mature Soybean (Glycine max) pollen grains replicate 1 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
2.6 94.5 GSM293956 13_2286.2F.R031P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6 94.5 GSM293594 25_2056.2B.R020P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5 94.2 GSM292938 19_1524.1M.R315P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5 94.2 GSM294006 59_3094.2F.V7F1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5 94.2 GSM294236 85_3128.2H.SLH1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4 93.8 GSM294120 75_2294.2G.R041P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4 93.8 GSM293472 59_1628.1R.R312P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4 93.8 GSM294237 86_3142.2H.SLH3P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4 93.8 GSM293390 74_1588.1Q.R230P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.56 0 848 GmaAffx.61026.1.S1_at BG155002 - - 1e-1 At2g48090 unknown protein C.G. S.X.
0.02 2e-2 40 Gma.2808.1.S1_at CD404724 - - 1e-35 At3g48040 ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10) C.G. S.X.
0.04 8e-2 38 GmaAffx.68105.1.S1_at BM107783 - - 3e-1 At2g44910 ATHB4 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4) C.G. S.X.
0.04 3e-1 36 GmaAffx.56205.1.A1_at BU550336 - - 4e+0 At5g55410 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.04 3e-1 36 GmaAffx.54350.1.S1_at BU927299 - - 2e-1 At5g26790 unknown protein C.G. S.X.
0.03 3e-1 36 Gma.13087.2.S1_at BG043859 - - 4e-1 At5g10300 MES5 (METHYL ESTERASE 5) C.G. S.X.
0.01 1e+0 34 PsAffx.C47000046_at PsAffx.C47000046 - - 3e+0 At1g53785 unknown protein C.G. S.X.
0.01 1e+0 34 PsAffx.C44000033_at PsAffx.C44000033 - - 3e-4 At5g01530 chlorophyll A-B binding protein CP29 (LHCB4) C.G. S.X.
0.01 1e+0 34 PsAffx.C34000051_at PsAffx.C34000051 - - 1e-1 At5g61820 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 9e-1 34 Arabidopsis thaliana At1g69800 843316 CBS domain-containing protein F:unknown;P:biological_process unknown;C:cellular_component unknown;MOBPAF - - - C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig25138_at Contig25138 - - 3e+0 At1g19740 ATP-dependent protease La (LON) domain-containing protein C.G. S.X.
0.03 4e-1 36 Oryza sativa Os04g0672300 AK101246.1 - Conserved hypothetical protein 5e-1 At5g48290 heavy-metal-associated domain-containing protein C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.9845.2.A1_at CV239201 - - 4e+0 At4g25433 peptidoglycan-binding LysM domain-containing protein C.G. S.X.
0.05 9e-1 34 Triticum aestivum Ta.3390.1.A1_at BJ211094 - - 8e+0 At1g62780 unknown protein C.G. S.X.
0.14 4e-3 40 Vitis vinifera 1608744_at BQ796832 hypothetical protein LOC100252279 - 5e-1 At2g42780 - C.G. S.X.
0.04 1e-1 36 Zea mays Zm.17708.1.S1_at CK369560 - - 3e-1 At3g55460 SCL30 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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