CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.92143.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 74.2 GmaAffx.92143.1.S1_s_at CF806865 - - 1e-13 At3g44190 pyridine nucleotide-disulphide oxidoreductase family protein S.X. H.G.
0.55 76.3 GmaAffx.93575.1.S1_s_at CF808812 - - 5e+0 At4g39780 AP2 domain-containing transcription factor, putative S.X. H.G.
0.50 71.7 Gma.5129.1.S1_at CF920232 - - 3e-12 At5g22140 pyridine nucleotide-disulphide oxidoreductase family protein S.X. H.G.
0.40 57.1 GmaAffx.79390.1.S1_at BU550458 transcription factor bZIP91 - 1e-4 At1g08320 bZIP family transcription factor S.X. H.G.
0.29 39.0 GmaAffx.79390.3.S1_at BU082743 bZIP transcription factor bZIP90 - 4e-4 At1g08320 bZIP family transcription factor S.X. H.G.
0.21 26.6 Gma.17739.1.S1_at AW310535 - - 4e-1 At2g04220 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 97.4 GSM293836 76_2176.2D.R217P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293310 91_1180.1P.R110P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM292355 24_C103.1F.R9F3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM292603 32_1362.1I.R226P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM294025 76_3104.2F.V7F3P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM293324 14_C074.1Q.V7Q1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM292583 13_1360.1I.R225P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM293859 12_2234.2E.R077P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM292596 26_C146.1I.V7I1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM292843 22_C214.1L.V7L3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 3e-120 430 Gma.5129.1.S1_at CF920232 - - 3e-12 At5g22140 pyridine nucleotide-disulphide oxidoreductase family protein C.G. S.X.
0.06 1e-2 40 GmaAffx.9147.1.S1_at BI321279 - - 3e+0 At5g28640 AN3 (ANGUSTIFOLIA 3) C.G. S.X.
0.03 6e-1 34 PsAffx.C117000011_at PsAffx.C117000011 - - 2e+0 At5g53420 - C.G. S.X.
0.01 2e+0 32 PsAffx.C256000011_at PsAffx.C256000011 - - 1e-1 At3g45970 ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1) C.G. S.X.
0.04 2e+0 32 HgAffx.7321.1.S1_at CB824890 - - 4e+0 Atmg00480 - C.G. S.X.
0.04 2e+0 32 HgAffx.6887.1.S1_at CB825324 - - 3e-1 At3g11020 DREB2B (DRE/CRT-BINDING PROTEIN 2B) C.G. S.X.
0.05 2e+0 32 HgAffx.14014.1.S1_at CB825991 - - 1e+1 Atmg00990 - C.G. S.X.
0.04 2e+0 32 HgAffx.13401.1.S1_at CB374581 - - 4e+0 At1g14340 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.03 2e+0 32 GmaAffx.88838.1.A1_at CK605845 - - 2e-56 At4g22260 IM (IMMUTANS) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 1e-13 75 Arabidopsis thaliana At3g44190 823541 pyridine nucleotide-disulphide oxidoreductase family protein F:electron carrier activity, oxidoreductase activity, FAD binding;P:unknown;C:unknown;BOFAMP - - - C.G. S.X.
0.07 8e-1 32 Hordeum vulgare HVSMEi0001B07r2_at HVSMEi0001B07r2 - - 6e-1 At5g34828 - C.G. S.X.
0.04 9e-1 34 Oryza sativa OsAffx.32018.1.S1_at - - - 0 C.G. S.X.
0.06 3e-6 52 Populus trichocarpa PtpAffx.200695.1.S1_at pmrna1344 hypothetical protein - 6e-10 At5g22140 pyridine nucleotide-disulphide oxidoreductase family protein C.G. S.X.
0.05 7e+0 30 Triticum aestivum TaAffx.80854.1.S1_at CA691813 - - 3e+0 At5g35069 unknown protein C.G. S.X.
0.16 2e-9 59 Vitis vinifera 1611145_at CF513038 hypothetical protein LOC100263525 - 4e-9 At3g44190 pyridine nucleotide-disulphide oxidoreductase family protein C.G. S.X.
0.04 7e-1 32 Zea mays Zm.7610.1.A1_at BM079177 hypothetical protein LOC100279299 - 5e+0 At1g16060 ovule development protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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