Gene omics information

Query gene ID	GmaAffx.92107.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.90	93.7	GmaAffx.92107.1.S1_s_at	CF807832	-	-	7e-2	At3g04640	glycine-rich protein	S.X.	H.G.	Please select
0.57	78.8	GmaAffx.75174.1.S1_at	AW185028	-	-	7e-5	At1g26670	VTI1B	S.X.	H.G.	Please select
0.53	74.2	GmaAffx.85555.1.S1_at	AW317264	-	-	9e-1	At2g36295	unknown protein	S.X.	H.G.	Please select
0.52	73.1	GmaAffx.1096.1.S1_at	BM086121	-	-	4e-1	At3g15040	unknown protein	S.X.	H.G.	Please select
0.52	73.1	GmaAffx.20219.1.S1_at	CA799858	-	-	9e-1	At1g02960	unknown protein	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.71902.1.S1_at	BE607717	-	-	3e-1	At5g58680	armadillo/beta-catenin repeat family protein	S.X.	H.G.	Please select
0.46	65.5	Gma.8009.2.S1_at	BI424216	-	-	5e-31	At2g38610	KH domain-containing protein	S.X.	H.G.	Please select
0.46	65.5	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	S.X.	H.G.	Please select
0.42	59.3	Gma.5562.3.S1_at	AW830226	-	-	9e-28	At2g47070	SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)	S.X.	H.G.	Please select
0.40	57.1	Gma.4412.2.S1_a_at	BG044207	TATA-box binding protein	-	3e-6	At3g13445	TBP1 (TATA BINDING PROTEIN 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.3	98.9	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM292892	67_1464.1L.R282P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293584	16_2089.2B.R181U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293133	46_C044.1O.SLO2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292873	4_1486.1L.R293P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293634	61_3026.2B.SLB2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM244808	17_SLO.M5W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.2	96.0	GSM294277	30_3152.2I.SLI2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292924	96_C206.1L.SLL2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293956	13_2286.2F.R031P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.69	0	1025	Gma.1362.1.S1_at	BQ297153	-	-	8e-3	At4g33985	unknown protein	C.G.	S.X.	Please select
0.86	0	690	GmaAffx.90596.1.S1_s_at	CF806321	-	-	5e-3	At4g33985	unknown protein	C.G.	S.X.	Please select
0.50	0	690	Gma.1362.2.S1_at	BU765611	-	-	1e-2	At4g33985	unknown protein	C.G.	S.X.	Please select
0.04	6e-3	42	GmaAffx.77802.1.S1_at	BI968400	-	-	1e-3	At3g49940	LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38)	C.G.	S.X.	Please select
0.02	2e-2	40	HgAffx.10561.1.S1_at	CB378061	-	-	1e-2	At1g75550	glycine-rich protein	C.G.	S.X.	Please select
0.04	9e-2	38	HgAffx.19958.1.S1_at	CB376026	-	-	6e-2	At5g06990	unknown protein	C.G.	S.X.	Please select
0.04	9e-2	38	HgAffx.19152.1.S1_at	CB374217	-	-	2e-1	At1g13690	ATE1	C.G.	S.X.	Please select
0.02	4e-1	36	PsAffx.CL338Contig1_at	PsAffx.CL338Contig1	-	-	4e-2	At1g35430	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	PsAffx.CL2410Contig1_at	PsAffx.CL2410Contig1	-	-	3e-1	At4g09830	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e-2	38	Arabidopsis thaliana	At3g04640	819622	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-2	38	Hordeum vulgare	EBro02_SQ006_H19_at	EBro02_SQ006_H19	-	-	5e-5	At2g35960	NHL12	C.G.	S.X.	Please select
0.04	5e-4	46	Oryza sativa	Os08g0369700	9636.m02793	-	HesB/YadR/YfhF family protein	7e-5	At5g03905	hesB-like domain-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.223777.1.S1_at	pmrna41947	-	-	2e-4	At1g75550	glycine-rich protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	7e-2	38	Triticum aestivum	TaAffx.5770.1.S1_at	CA699260	-	-	3e-1	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	C.G.	S.X.	Please select
0.11	2e-14	77	Vitis vinifera	1619240_at	CB348525	hypothetical protein LOC100250717	-	6e-7	At4g33985	unknown protein	C.G.	S.X.	Please select
0.05	2e-3	42	Zea mays	Zm.16829.2.S1_at	AY105706.1	hypothetical protein LOC100277102	-	5e-4	At4g33985	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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