Gene omics information

Query gene ID	GmaAffx.92046.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	81.8	GmaAffx.92046.1.S1_at	CF805896	-	-	2e+0	At3g13784	AtcwINV5 (Arabidopsis thaliana cell wall invertase 5)	S.X.	H.G.	Please select
0.88	93.4	GmaAffx.50828.1.S1_at	BM094403	-	-	8e-5	At5g01050	laccase family protein / diphenol oxidase family protein	S.X.	H.G.	Please select
0.88	93.4	GmaAffx.3562.1.S1_s_at	BI321106	-	-	7e-3	At2g40370	LAC5 (laccase 5)	S.X.	H.G.	Please select
0.74	89.2	GmaAffx.90262.1.S1_at	CF805987	-	-	2e-15	At4g05050	UBQ11 (UBIQUITIN 11)	S.X.	H.G.	Please select
0.67	86.1	GmaAffx.271.1.S1_at	AW350518	-	-	1e-4	At3g13790	ATBFRUCT1	S.X.	H.G.	Please select
0.64	83.4	GmaAffx.93383.1.S1_at	CF806810	-	-	4e+0	At3g27210	unknown protein	S.X.	H.G.	Please select
0.63	82.9	Gma.3831.1.S1_at	AI496603	-	-	2e-1	At1g18790	RWP-RK domain-containing protein	S.X.	H.G.	Please select
0.55	76.3	GmaAffx.82269.1.S1_s_at	BI788213	-	-	1e-2	At1g68190	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.93545.1.S1_at	CF808829	-	-	2e+0	At3g17668	ENA (ENHANCER OF ATNSI ACTIVITY)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
73.1	100.0	GSM294151	16_3139.2H.R9H3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
68.4	100.0	GSM293756	88_2113.2C.R285L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
61.8	99.9	GSM293113	28_C047.1O.R9O2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
57.1	99.9	GSM293408	90_C079.1Q.R9Q2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
50.5	99.9	GSM293294	77_C067.1P.R9P3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
50.0	99.9	GSM293080	7_C033.1N.R9N3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
47.8	99.9	GSM294092	4_3111.2G.R9G1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
46.4	99.9	GSM293197	79_C053.1O.R9O3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
46.3	99.9	GSM294303	54_3153.2I.R9I2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
41.6	99.9	GSM294112	68_3117.2G.R9G2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	0	700	GmaAffx.271.1.S1_at	AW350518	-	-	1e-4	At3g13790	ATBFRUCT1	C.G.	S.X.	Please select
0.31	1e-47	190	Gma.16814.1.S1_at	AJ563368.1	beta-fructofuranosidase	-	1e-9	At3g52600	AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)	C.G.	S.X.	Please select
0.02	1e-1	38	PsAffx.C265000011_at	PsAffx.C265000011	-	-	2e+0	At5g38810	F-box family protein	C.G.	S.X.	Please select
0.03	1e-1	38	GmaAffx.92714.1.S1_at	CF808439	-	-	1e+0	At5g51040	unknown protein	C.G.	S.X.	Please select
0.03	1e-1	38	Gma.18039.2.A1_s_at	CD412595	-	-	3e+0	At1g75270	DHAR2 (DEHYDROASCORBATE REDUCTASE 2)	C.G.	S.X.	Please select
0.02	1e-1	38	Gma.12392.1.S1_at	BG726522	-	-	2e+0	At4g15450	-	C.G.	S.X.	Please select
0.00	2e+0	34	PsAffx.C77000058_at	PsAffx.C77000058	-	-	1e-3	At2g22430	ATHB6	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C4000018_at	PsAffx.C4000018	-	-	2e-5	At5g54670	ATK3 (ARABIDOPSIS THALIANA KINESIN 3)	C.G.	S.X.	Please select
0.01	8e+0	32	PsAffx.C590000001_at	PsAffx.C590000001	-	-	1e-1	At4g35510	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At3g13784	820590	AtcwINV5 (Arabidopsis thaliana cell wall invertase 5)	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	7e-1	34	Hordeum vulgare	HVSMEg0005N10r2_at	HVSMEg0005N10r2	-	-	1e+0	At2g20340	tyrosine decarboxylase, putative	C.G.	S.X.	Please select
0.03	1e+1	32	Oryza sativa	Os07g0424900	9635.m02314	-	-	2e+0	At5g50090	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	Ptp.215.1.A1_at	CK087509	-	-	1e-1	At3g44460	DPBF2	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	32	Triticum aestivum	Ta.1673.1.S1_at	BE446763	-	-	2e+0	At3g16770	ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)	C.G.	S.X.	Please select
0.14	3e-5	48	Vitis vinifera	1611027_at	CB978747	cell wall apoplastic invertase	-	1e-6	At3g52600	AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)	C.G.	S.X.	Please select
0.03	2e-1	36	Zea mays	Zm.1497.1.S1_at	AF050631.1	miniature seed1	-	2e-11	At3g52600	AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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