CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.91748.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 74.2 GmaAffx.91748.1.S1_s_at CF807473 - - 1e-102 At2g01970 endomembrane protein 70, putative S.X. H.G.
0.83 92.5 GmaAffx.21619.1.S1_at BU761813 - - 9e-80 At5g56280 CSN6A S.X. H.G.
0.67 86.1 GmaAffx.78204.1.S1_at CD411872 - - 7e-3 At4g25315 Expressed protein S.X. H.G.
0.61 81.8 GmaAffx.52028.1.S1_at BE023291 - - 1e-50 At5g20570 RBX1 (RING-BOX 1) S.X. H.G.
0.40 57.1 Gma.2892.2.S1_at BI424590 - - 5e-47 At1g29150 ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9) S.X. H.G.
0.33 46.1 GmaAffx.87924.1.S1_at AW596893 - - 9e-39 At3g05000 transport protein particle (TRAPP) component Bet3 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.7 96.8 GSM309528 storage protein suppression expt, control tech rep2 GSE12314 Storage Protein Suppression in Transgenic Soybean Cotyledons
3.1 95.8 GSM309527 storage protein suppression expt, control tech rep1 GSE12314 Storage Protein Suppression in Transgenic Soybean Cotyledons
3.1 95.8 GSM294132 86_3112.2G.R9G1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9 95.4 GSM293247 34_C066.1P.R9P2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM309531 storage protein suppression expt, RNAi biol rep2, tech rep2 GSE12314 Storage Protein Suppression in Transgenic Soybean Cotyledons
2.7 94.8 GSM293594 25_2056.2B.R020P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7 94.8 GSM294175 38_3132.2H.R9H1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6 94.5 GSM293459 47_1596.1R.R009P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6 94.5 GSM309557 storage protein suppression expt, RNAi biol rep1, tech rep2 GSE12314 Storage Protein Suppression in Transgenic Soybean Cotyledons
2.6 94.5 GSM294206 58_2338.2H.R240P_new, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.97 0 1417 GmaAffx.91748.1.S1_at CF807473 - - 1e-102 At2g01970 endomembrane protein 70, putative C.G. S.X.
0.29 1e-23 111 GmaAffx.90654.1.S1_s_at CF806379 - - 5e-33 At2g01970 endomembrane protein 70, putative C.G. S.X.
0.29 1e-23 111 GmaAffx.90654.1.S1_at CF806379 - - 5e-33 At2g01970 endomembrane protein 70, putative C.G. S.X.
0.01 5e-1 36 PsAffx.C160000001_at PsAffx.C160000001 - - 2e+0 At5g09805 IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3) C.G. S.X.
0.02 5e-1 36 HgAffx.19710.1.S1_at CB826017 - - 4e-1 At3g13780 - C.G. S.X.
0.04 5e-1 36 GmaAffx.76153.1.S1_at BM188281 - - 3e+0 At2g44304 unknown protein C.G. S.X.
0.03 2e+0 34 GmaAffx.64338.2.A1_at BM520109 - - 6e-33 At1g30470 SIT4 phosphatase-associated family protein C.G. S.X.
0.03 2e+0 34 GmaAffx.64338.2.S1_at BE475311 - - 6e-33 At1g30470 SIT4 phosphatase-associated family protein C.G. S.X.
0.03 2e+0 34 GmaAffx.62877.1.A1_at BE658061 - - 3e+0 At5g03350 legume lectin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 1e-102 373 Arabidopsis thaliana At2g01970 814728 endomembrane protein 70, putative F:unknown;P:transport;C:integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall;MPOF - - - C.G. S.X.
0.38 1e-30 133 Hordeum vulgare Contig15504_at Contig15504 - - 2e-14 At1g14670 endomembrane protein 70, putative C.G. S.X.
0.33 1e-51 204 Oryza sativa Os08g0162000 BX901451 - Nonaspanin (TM9SF) family protein 9e-35 At2g01970 endomembrane protein 70, putative C.G. S.X.
0.46 1e-88 327 Populus trichocarpa Ptp.1915.1.S1_at AF187853.1 hypothetical protein - 4e-101 At5g37310 - C.G. S.X.
0.25 5e-62 238 Triticum aestivum Ta.21364.1.S1_s_at BJ265438 - - 4e-28 At1g14670 endomembrane protein 70, putative C.G. S.X.
0.27 5e-59 226 Vitis vinifera 1614620_at CF404986 hypothetical protein LOC100249044 - 5e-37 At5g37310 - C.G. S.X.
0.58 3e-80 297 Zea mays Zm.17591.2.S1_at CK347917 - - 2e-52 At1g14670 endomembrane protein 70, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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