Gene omics information

Query gene ID	GmaAffx.91636.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	79.5	GmaAffx.91636.1.S1_s_at	CF807361	-	-	3e-63	At1g57870	ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)	S.X.	H.G.	Please select
0.83	92.5	GmaAffx.87881.1.S1_at	BU082329	-	-	4e-12	At1g14530	THH1 (TOM THREE HOMOLOG 1)	S.X.	H.G.	Please select
0.71	87.8	Gma.2892.2.S1_a_at	BI424590	-	-	5e-47	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	S.X.	H.G.	Please select
0.69	86.8	Gma.7498.3.S1_at	CA800433	-	-	4e-71	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	S.X.	H.G.	Please select
0.59	79.5	Gma.5135.2.S1_at	BU925878	-	-	2e-42	At5g08500	transmembrane CLPTM1 family protein	S.X.	H.G.	Please select
0.57	78.8	Gma.5672.9.S1_at	AW781478	-	-	2e-102	At1g54270	EIF4A-2	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.478.5.S1_at	AW569125	-	-	4e+0	At4g00467	-	S.X.	H.G.	Please select
0.52	73.1	GmaAffx.15960.1.S1_at	AI495609	-	-	3e-22	At4g01320	ATSTE24	S.X.	H.G.	Please select
0.50	71.7	Gma.9706.3.S1_x_at	AW133151	-	-	2e-5	At2g39840	TOPP4	S.X.	H.G.	Please select
0.50	71.7	Gma.2892.2.S1_at	BI424590	-	-	5e-47	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.4	98.2	GSM293333	22_1549.1Q.R078L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293377	62_1573.1Q.R160L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293595	26_2077.2B.R246U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293381	66_C087.1Q.V7Q3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8	95.1	GSM293321	11_1561.1Q.R140L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293327	17_1581.1Q.R195U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM292983	5_1499.1M.R300L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293369	55_1557.1Q.R126L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293879	30_2202.2E.R190P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293983	38_2255.2F.R317L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.58	0	1499	Gma.4037.1.S1_at	AW309605	-	-	2e-177	At1g09840	ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)	C.G.	S.X.	Please select
0.66	0	809	Gma.4037.2.S1_s_at	CA784461	-	-	1e-16	At1g09840	ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)	C.G.	S.X.	Please select
0.66	0	809	Gma.4037.2.S1_at	CA784461	-	-	1e-16	At1g09840	ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)	C.G.	S.X.	Please select
0.14	1e-14	81	GmaAffx.82711.1.S1_at	BI786200	-	-	1e-20	At4g00720	ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32)	C.G.	S.X.	Please select
0.12	1e-7	57	Gma.4193.1.S1_at	AW705861	-	-	3e-133	At5g26751	ATSK11	C.G.	S.X.	Please select
0.11	1e-7	57	Gma.11129.1.S1_at	BE657610	-	-	6e-119	At3g05840	ATSK12	C.G.	S.X.	Please select
0.08	9e-6	52	Gma.3291.2.S1_at	BM520616	-	-	6e-72	At4g18710	BIN2 (BRASSINOSTEROID-INSENSITIVE 2)	C.G.	S.X.	Please select
0.07	4e-5	50	Gma.10031.1.S1_at	AI960218	-	-	7e-11	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select
0.07	6e-4	46	Gma.2064.1.S1_at	BE821945	-	-	5e-67	At4g18710	BIN2 (BRASSINOSTEROID-INSENSITIVE 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	3e-63	242	Arabidopsis thaliana	At1g57870	842162	ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)	F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:response to salt stress, hyperosmotic response;C:cytosol;MOPFBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	3e-15	81	Hordeum vulgare	Contig5540_at	Contig5540	-	-	1e-52	At3g05840	ATSK12	C.G.	S.X.	Please select
0.28	3e-34	147	Oryza sativa	Os03g0841800	AK070062.1	-	Shaggy-related protein kinase kappa (EC 2.7.1.-)(ASK-kappa) (AtK-1)	4e-74	At1g57870	ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.43	4e-122	438	Populus trichocarpa	PtpAffx.17228.2.S1_a_at	CV261896	hypothetical protein	-	1e-160	At1g09840	ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	3e-11	69	Triticum aestivum	Ta.3003.1.S1_x_at	BE398996	-	-	3e-44	At5g26751	ATSK11	C.G.	S.X.	Please select
0.53	4e-174	609	Vitis vinifera	1615576_at	CB970198	-	-	1e-147	At1g09840	ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)	C.G.	S.X.	Please select
0.15	7e-10	63	Zea mays	ZmAffx.1.1.S1_at	AY722707.1	hypothetical LOC542518	-	5e-51	At1g57870	ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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