Gene omics information

Query gene ID	GmaAffx.91601.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	92.5	GmaAffx.91601.1.S1_at	CF807326	-	-	1e-47	At5g57390	AIL5 (AINTEGUMENTA-LIKE 5)	S.X.	H.G.	Please select
0.53	74.2	GmaAffx.91601.1.S1_s_at	CF807326	-	-	1e-47	At5g57390	AIL5 (AINTEGUMENTA-LIKE 5)	S.X.	H.G.	Please select
0.10	13.0	GmaAffx.91468.1.S1_at	CF805702	-	-	1e-1	At5g62180	AtCXE20 (Arabidopsis thaliana carboxyesterase 20)	S.X.	H.G.	Please select
0.06	9.0	GmaAffx.85651.1.S1_at	BE661628	-	-	2e-1	At3g42310	unknown protein	S.X.	H.G.	Please select
0.05	8.0	Gma.1927.3.S1_at	BF598349	-	-	1e-11	At4g36400	FAD linked oxidase family protein	S.X.	H.G.	Please select
0.04	7.0	GmaAffx.86851.1.S1_at	BU091270	-	-	3e-16	At5g60790	ATGCN1	S.X.	H.G.	Please select
0.02	4.5	GmaAffx.76498.1.S1_s_at	AI736837	-	-	4e-9	At5g41670	6-phosphogluconate dehydrogenase family protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.1	99.7	GSM294185	47_3139.2H.R9H3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.9	99.6	GSM293224	13_1155.1P.R097U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.5	99.4	GSM293485	70_C107.1R.R9R3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.4	99.4	GSM293013	19_C033.1N.R9N3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.4	99.4	GSM294645	19_3233.2M.R9M3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.7	99.4	GSM294243	91_3137.2H.R9H2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.5	99.3	GSM294089	47_3111.2G.R9G1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.5	99.3	GSM294137	90_2291.2G.R251U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.2	99.3	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.6	99.2	GSM293905	54_3083.2E.R9E2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1471	GmaAffx.91601.1.S1_s_at	CF807326	-	-	1e-47	At5g57390	AIL5 (AINTEGUMENTA-LIKE 5)	C.G.	S.X.	Please select
0.47	0	730	GmaAffx.23851.1.S1_at	CA852578	-	-	1e-34	At5g57390	AIL5 (AINTEGUMENTA-LIKE 5)	C.G.	S.X.	Please select
0.32	3e-39	163	GmaAffx.83598.1.S1_at	BU964918	PLETHORA 2	-	2e-112	At1g51190	PLT2 (PLETHORA 2)	C.G.	S.X.	Please select
0.14	2e-9	63	GmaAffx.3540.1.S1_at	BE657375	-	-	4e-11	At4g37750	ANT (AINTEGUMENTA)	C.G.	S.X.	Please select
0.17	6e-7	56	GmaAffx.29044.1.S1_at	BU551115	-	-	1e-44	At4g37750	ANT (AINTEGUMENTA)	C.G.	S.X.	Please select
0.12	5e-4	46	Gma.8249.1.S1_at	BI674319	-	-	3e-55	At5g65510	AIL7 (AINTEGUMENTA-like 7)	C.G.	S.X.	Please select
0.03	1e-1	38	GmaAffx.81415.1.S1_at	CA938660	lipoxygenase-9	-	5e+0	At5g60964	-	C.G.	S.X.	Please select
0.03	5e-1	36	PsAffx.psHB038xC16f_at	PsAffx.psHB038xC16f	-	-	8e-1	At5g36722	unknown protein	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C111000012_at	PsAffx.C111000012	-	-	3e-1	At5g63970	copine-related	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	1e-47	190	Arabidopsis thaliana	At5g57390	835845	AIL5 (AINTEGUMENTA-LIKE 5)	Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	5e-5	48	Hordeum vulgare	Contig15309_at	Contig15309	-	-	1e-2	At4g37750	ANT (AINTEGUMENTA)	C.G.	S.X.	Please select
0.29	2e-47	190	Oryza sativa	Os06g0657500	AK101959.1	-	ANT (Ovule development protein aintegumenta)	3e-10	At5g57390	AIL5 (AINTEGUMENTA-LIKE 5)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.64	5e-69	262	Populus trichocarpa	PtpAffx.214377.1.S1_s_at	pmrna27977	AP2 domain-containing transcription factor /// AP2 domain-containing transcription factor	-	1e-24	At5g65510	AIL7 (AINTEGUMENTA-like 7)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	2e-12	73	Triticum aestivum	TaAffx.64176.1.S1_at	BJ312281	-	-	8e-11	At1g72570	DNA binding / transcription factor	C.G.	S.X.	Please select
0.21	2e-12	71	Vitis vinifera	1610205_at	CF510900	hypothetical protein LOC100252316	-	4e-34	At4g37750	ANT (AINTEGUMENTA)	C.G.	S.X.	Please select
0.32	1e-35	149	Zea mays	Zm.123.1.S1_at	AY109146.1	heat shock complementing factor1	-	2e-5	At5g57390	AIL5 (AINTEGUMENTA-LIKE 5)	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage