Gene omics information

Query gene ID	GmaAffx.91496.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.91496.1.S1_s_at	CF807221	-	-	4e+0	At3g17300	-	S.X.	H.G.	Please select
0.83	92.5	GmaAffx.91496.1.S1_at	CF807221	-	-	4e+0	At3g17300	-	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.76504.1.S1_at	BF009359	-	-	7e-2	At2g34540	unknown protein	S.X.	H.G.	Please select
0.60	80.7	GmaAffx.2047.1.S1_at	CA801759	-	-	2e-14	At3g28570	AAA-type ATPase family protein	S.X.	H.G.	Please select
0.60	80.7	GmaAffx.66195.1.S1_at	AI988572	-	-	1e-12	At5g11950	protein homodimerization	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.41354.1.S1_at	BI786979	-	-	6e+0	At5g66550	Maf family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.6	99.5	GSM293756	88_2113.2C.R285L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.7	99.4	GSM293248	35_1155.1P.R097L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM294169	32_3137.2H.R9H2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.7	99.3	GSM293294	77_C067.1P.R9P3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.6	99.2	GSM293553	67_3017.2A.R9A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.5	99.2	GSM294151	16_3139.2H.R9H3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.9	99.2	GSM292240	49_C033.1B.R9B3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7	99.1	GSM292170	26-C003.1A.R9A1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.5	99.1	GSM293763	9_3039.2C.R9C1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.0	99.0	GSM294089	47_3111.2G.R9G1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	914	GmaAffx.91496.1.S1_at	CF807221	-	-	4e+0	At3g17300	-	C.G.	S.X.	Please select
0.24	1e-62	240	GmaAffx.76504.1.A1_at	BE660540	-	-	7e-2	At2g34540	unknown protein	C.G.	S.X.	Please select
0.24	1e-62	240	GmaAffx.76504.1.S1_at	BF009359	-	-	7e-2	At2g34540	unknown protein	C.G.	S.X.	Please select
0.12	5e-3	42	GmaAffx.55754.1.S1_at	BM954552	-	-	3e+0	At5g17190	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Gma.8371.1.S1_at	CD399193	-	-	1e-14	At4g34480	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C63000016_at	PsAffx.C63000016	-	-	4e-1	At2g30200	[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase	C.G.	S.X.	Please select
0.00	5e+0	32	PsAffx.C183000031_at	PsAffx.C183000031	-	-	6e-1	At3g06020	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	32	PsAffx.C149000026_at	PsAffx.C149000026	-	-	7e-1	At3g21300	RNA methyltransferase family protein	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C101000052_at	PsAffx.C101000052	-	-	6e-2	At3g27160	GHS1 (GLUCOSE HYPERSENSITIVE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e+0	32	Arabidopsis thaliana	At3g17300	820993	-	F:unknown;P:unknown;C:unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	32	Hordeum vulgare	HVSMEn0017O06r2_at	HVSMEn0017O06r2	-	-	6e-2	At1g44980	pectinesterase family protein	C.G.	S.X.	Please select
0.03	4e-1	36	Oryza sativa	Os08g0558100	AK065151.1	-	Calcium-binding EF-hand domain containing protein	1e-1	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	5e-3	42	Populus trichocarpa	PtpAffx.210533.1.S1_at	pmrna20649	hypothetical protein	-	3e-9	At3g28580	AAA-type ATPase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	32	Triticum aestivum	TaAffx.28930.1.S1_at	CA654396	-	-	4e+0	At3g60220	ATL4	C.G.	S.X.	Please select
0.04	4e-3	40	Vitis vinifera	1619139_at	CB919812	hypothetical protein LOC100261695	-	5e-6	At1g04070	TOM22-I (TRANSLOCASE OF OUTER MEMBRANE 22-I)	C.G.	S.X.	Please select
0.03	2e+1	28	Zea mays	ZmAffx.988.1.S1_at	AI834703	-	-	3e+0	At5g50562	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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