CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.91355.1.S1_s_at

Gene name alternative oxidase 2b

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.9 GmaAffx.91355.1.S1_s_at CF807080 alternative oxidase 2b - 7e-5 At5g64210 AOX2 S.X. H.G.
0.55 76.3 GmaAffx.86361.1.S1_s_at BG508205 alternative oxidase 2b - 4e-9 At3g27620 AOX1C S.X. H.G.
0.53 74.2 GmaAffx.91573.1.S1_at CF807298 - - 5e-9 At3g05200 ATL6 S.X. H.G.
0.50 71.7 Gma.11120.1.S1_at U87907.1 alternative oxidase 2b - 3e-6 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) S.X. H.G.
0.50 71.7 GmaAffx.70634.1.S1_s_at BQ079384 - - 4e-9 At3g05200 ATL6 S.X. H.G.
0.35 48.6 GmaAffx.81051.2.S1_at AI441921 - - 8e-21 At3g08760 ATSIK S.X. H.G.
0.28 39.0 Gma.1824.1.S1_at BI469795 - - 7e-16 At5g26030 FC1 (ferrochelatase 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.8 99.0 GSM209597 susceptible_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.5 98.3 GSM292208 70_C004.1A.R9A1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3 98.2 GSM293248 35_1155.1P.R097L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1 98.1 GSM292422 25_1253.1G.R161U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1 98.1 GSM293527 43_2015.2A.R250L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9 98.0 GSM293416 98_1565.1Q.R153U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5 97.7 GSM293887 38_2229.2E.R022L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5 97.7 GSM209596 resistant_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.5 97.7 GSM292273 18_1177.1E.R109U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM209591 mock_0hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.64 0 1162 Gma.11120.1.S1_at U87907.1 alternative oxidase 2b - 3e-6 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) C.G. S.X.
0.20 5e-22 105 Gma.8415.1.S1_at U87906.1 alternative oxidase 2a - 3e-21 At5g64210 AOX2 C.G. S.X.
0.06 2e-9 63 Gma.1439.1.S1_at X68702.1 alternative oxidase - 3e-43 At3g22360 AOX1B C.G. S.X.
0.04 3e-5 50 PsAffx.C27000038_at PsAffx.C27000038 - - 3e-2 At3g27620 AOX1C C.G. S.X.
0.02 4e-1 36 PsAffx.C105000040_at PsAffx.C105000040 - - 4e-2 At2g18245 unknown protein C.G. S.X.
0.01 2e+0 34 PsAffx.C239000010_at PsAffx.C239000010 - - 3e+0 At4g19110 protein kinase, putative C.G. S.X.
0.03 2e+0 34 GmaAffx.449.1.S1_at AW781940 - - 2e+0 At2g28105 - C.G. S.X.
0.03 2e+0 34 Gma.9694.1.S1_at CA936058 - - 6e-6 At4g28980 cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1) C.G. S.X.
0.02 2e+0 34 Gma.2627.1.S1_at CD416014 - - 4e-2 At4g36910 LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 7e-5 48 Arabidopsis thaliana At5g64210 836542 AOX2 encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria. - - - C.G. S.X.
0.10 2e-6 52 Hordeum vulgare Contig5890_at Contig5890 - - 3e-1 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) C.G. S.X.
0.07 2e-4 48 Oryza sativa Os02g0318100 9630.m02042 - Alternative oxidase 1a (Fragment) 4e-2 At3g22360 AOX1B C.G. S.X.
0.10 2e-9 63 Populus trichocarpa Ptp.2903.1.A1_s_at BP934529 hypothetical protein - 5e-16 At3g27620 AOX1C C.G. S.X.
0.06 5e-6 52 Triticum aestivum Ta.3379.1.S1_at AB078883.1 alternative oxidase - 8e-7 At1g32350 AOX1D (alternative oxidase 1D) C.G. S.X.
0.18 7e-27 119 Vitis vinifera 1611398_at CD801312 mitochondrial alternative oxidase 2 - 4e-18 At5g64210 AOX2 C.G. S.X.
0.12 5e-4 44 Zea mays Zm.13243.1.S1_at AY059646.1 alternative oxidase AOX1 precursor - 3e-6 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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