Gene omics information

Query gene ID	GmaAffx.91300.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	79.5	GmaAffx.91300.1.S1_s_at	CF805768	-	-	9e-67	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	S.X.	H.G.	Please select
0.91	98.6	Gma.4269.3.S1_a_at	CA784404	-	-	3e-19	At1g27450	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.92300.1.S1_s_at	CF807658	Chorismate synthase	-	5e-50	At1g48850	EMB1144 (embryo defective 1144)	S.X.	H.G.	Please select
0.60	80.7	Gma.4269.2.S1_a_at	BU083811	-	-	8e-17	At1g27450	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)	S.X.	H.G.	Please select
0.31	42.2	Gma.4310.1.S1_at	BE822674	chorismate synthase	-	3e-58	At1g48850	EMB1144 (embryo defective 1144)	S.X.	H.G.	Please select
0.26	33.9	GmaAffx.88920.1.S1_s_at	CK605763	-	-	3e-60	At1g65930	isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.7	99.1	GSM171666	26_V.E.I.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.8	99.0	GSM171686	30_V.F.I.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.2	98.9	GSM171653	22_Z.E.I.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.8	98.7	GSM244916	4_SLO.I3U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.8	98.7	GSM244928	7_V71.I2W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.7	98.7	GSM171642	20_V.C.I.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.6	98.7	GSM171658	24_V.K.I.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.5	98.7	GSM171714	7_V.I.I.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.1	98.5	GSM244832	22_V71.I3L2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.9	98.5	GSM171632	18_W.E.I.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1509	GmaAffx.91300.1.S1_at	CF805768	-	-	9e-67	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.71	0	1352	GmaAffx.19546.1.S1_at	BE583628	-	-	6e-63	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.05	1e-7	57	GmaAffx.19546.2.S1_at	BG790795	-	-	5e-8	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.03	1e-1	38	Gma.17736.1.S1_at	AW598570	-	-	9e-2	At2g45120	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C5000185_at	PsAffx.C5000185	-	-	1e+0	At5g39730	avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C147000034_at	PsAffx.C147000034	-	-	1e-1	At4g39560	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C120000004_at	PsAffx.C120000004	-	-	1e+0	At3g44660	hda10 (histone deacetylase 10)	C.G.	S.X.	Please select
0.00	2e+0	34	PsAffx.C106000055_at	PsAffx.C106000055	-	-	4e+0	At5g05700	ATE1 (ARGININE-TRNA PROTEIN TRANSFERASE 1)	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.7836.1.A1_at	BU549650	-	-	5e+0	At5g54190	PORA	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.59	9e-67	254	Arabidopsis thaliana	At5g17770	831645	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.46	1e-21	103	Hordeum vulgare	Contig3972_at	Contig3972	-	-	7e-7	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.41	5e-36	153	Oryza sativa	Os01g0814900	AK071859.1	-	Cytochrome b5 reductase	2e-13	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.55	3e-61	236	Populus trichocarpa	Ptp.2560.1.S1_s_at	CV270621	hypothetical protein	-	1e-65	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.28	3e-14	79	Triticum aestivum	Ta.10204.1.S1_at	CK212760	-	-	7e-10	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.52	7e-77	286	Vitis vinifera	1611672_at	CF404860	hypothetical protein LOC100247986	-	2e-24	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select
0.39	1e-26	119	Zea mays	Zm.428.1.S1_at	AF077372.1	hypothetical protein LOC100191335	-	8e-16	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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